Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8026N16.3 |
| Conread position: | 426-665 |
| Cow position: | chr2:33012450-33012697 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 49 |
| Conread position: | 434-670 |
| Cow position: | chr2:63776084-63775851 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 112, 19 |
| Conread position: | 436-643 |
| Cow position: | chr2:8615817-8615607 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 108, 69 |
| Conread position: | 443-681 |
| Cow position: | chr2:36320777-36321014 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 105, 48 |
| Conread position: | 445-663 |
| Cow position: | chr2:76013223-76012999 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 103, 23 |
| Conread position: | 445-665 |
| Cow position: | chr2:8364675-8364893 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 153, 81 |
| Conread position: | 446-691 |
| Cow position: | chr2:10798432-10798182 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 30, 7 |
| Conread position: | 448-661 |
| Cow position: | chr2:12537431-12537649 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 102, 57 |
| Conread position: | 448-665 |
| Cow position: | chr2:58682835-58682615 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 161, 57 |
| Conread position: | 453-668 |
| Cow position: | chr2:33530663-33530879 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 99, 52 |
| Conread position: | 480-663 |
| Cow position: | chr2:64104388-64104198 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 68, 25 |
| Conread position: | 480-664 |
| Cow position: | chr2:53353376-53353566 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 68, 25 |
| Conread position: | 480-686 |
| Cow position: | chr2:25402949-25402734 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 64, 25 |
| Conread position: | 481-665 |
| Cow position: | chr2:6322706-6322897 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 481-669 |
| Cow position: | chr2:79449000-79449183 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 118, 24 |
| Conread position: | 481-670 |
| Cow position: | chr2:16138111-16137924 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 84, 24 |
| Conread position: | 482-665 |
| Cow position: | chr2:6351998-6352186 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 65, 23 |
| Conread position: | 482-665 |
| Cow position: | chr2:23935905-23935708 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 23 |
| Conread position: | 482-670 |
| Cow position: | chr2:38087997-38088179 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 62, 14 |
| Conread position: | 483-624 |
| Cow position: | chr2:74085604-74085752 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 65, 18 |
| Conread position: | 486-665 |
| Cow position: | chr2:14921293-14921119 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 486-686 |
| Cow position: | chr2:78105800-78105596 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 490-665 |
| Cow position: | chr2:1148573-1148748 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 12 |
| Conread position: | 490-668 |
| Cow position: | chr2:75845566-75845397 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 15 |
| Conread position: | 494-656 |
| Cow position: | chr2:6609999-6610166 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 494-668 |
| Cow position: | chr2:28011888-28011713 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 115, 11 |
| Conread position: | 503-644 |
| Cow position: | chr2:2876536-2876679 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 15 |
| Conread position: | 503-668 |
| Cow position: | chr2:26421616-26421454 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 503-668 |
| Cow position: | chr2:71595210-71595385 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 507-690 |
| Cow position: | chr2:43312062-43312247 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 20 |
| Conread position: | 508-665 |
| Cow position: | chr2:36881446-36881605 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 51 |
| Conread position: | 508-676 |
| Cow position: | chr2:5075371-5075539 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 42, 93 |
| Conread position: | 510-668 |
| Cow position: | chr2:39519405-39519236 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 537-689 |
| Cow position: | chr2:63193453-63193610 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 541-662 |
| Cow position: | chr2:41146659-41146780 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 558-668 |
| Cow position: | chr2:41603740-41603631 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
Show alignments to all cow chromosomes.