Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8026N16.3 |
| Conread position: | 423-675 |
| Cow position: | chr21:13455402-13455649 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 125, 19 |
| Conread position: | 429-668 |
| Cow position: | chr21:28148237-28147994 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 10, 26 |
| Conread position: | 434-665 |
| Cow position: | chr21:40214378-40214151 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 129, 14 |
| Conread position: | 434-668 |
| Cow position: | chr21:29868493-29868734 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 13, 63 |
| Conread position: | 444-610 |
| Cow position: | chr21:10796297-10796464 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 56 |
| Conread position: | 445-656 |
| Cow position: | chr21:22744106-22743889 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 105, 37 |
| Conread position: | 445-665 |
| Cow position: | chr21:38926770-38926999 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 100, 60 |
| Conread position: | 448-644 |
| Cow position: | chr21:26869618-26869408 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 93, 51 |
| Conread position: | 448-657 |
| Cow position: | chr21:7169064-7168858 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 194, 54 |
| Conread position: | 448-665 |
| Cow position: | chr21:1721085-1721303 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 30, 61 |
| Conread position: | 453-602 |
| Cow position: | chr21:45963234-45963087 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 49 |
| Conread position: | 455-664 |
| Cow position: | chr21:34415959-34415754 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 86, 50 |
| Conread position: | 480-675 |
| Cow position: | chr21:33196946-33197140 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 481-665 |
| Cow position: | chr21:27199644-27199837 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 62, 150 |
| Conread position: | 481-668 |
| Cow position: | chr21:18082355-18082544 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 127, 24 |
| Conread position: | 482-660 |
| Cow position: | chr21:47730620-47730805 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 66, 23 |
| Conread position: | 482-665 |
| Cow position: | chr21:42906547-42906363 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 45, 20 |
| Conread position: | 485-665 |
| Cow position: | chr21:43037993-43038172 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 110, 20 |
| Conread position: | 488-663 |
| Cow position: | chr21:16336996-16337177 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 35, 20 |
| Conread position: | 490-665 |
| Cow position: | chr21:4261858-4262034 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 15 |
| Conread position: | 503-665 |
| Cow position: | chr21:33973961-33974131 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 508-668 |
| Cow position: | chr21:448446-448282 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 37, 57 |
| Conread position: | 508-668 |
| Cow position: | chr21:49647195-49647032 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 40, 19 |
| Conread position: | 527-675 |
| Cow position: | chr21:27769803-27769652 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 34, 116 |
Show alignments to all cow chromosomes.