Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8026N16.3 |
| Conread position: | 428-665 |
| Cow position: | chr3:83233651-83233416 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 8, 32 |
| Conread position: | 434-665 |
| Cow position: | chr3:28560797-28561033 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 18, 75 |
| Conread position: | 434-668 |
| Cow position: | chr3:33614420-33614657 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 189 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 15, 72 |
| Conread position: | 434-674 |
| Cow position: | chr3:53132394-53132627 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 117, 19 |
| Conread position: | 434-684 |
| Cow position: | chr3:69187108-69187372 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 10, 76 |
| Conread position: | 438-665 |
| Cow position: | chr3:1015418-1015650 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 441-668 |
| Cow position: | chr3:64079758-64079530 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 106, 14 |
| Conread position: | 445-602 |
| Cow position: | chr3:75990799-75990957 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 103, 57 |
| Conread position: | 445-610 |
| Cow position: | chr3:71500382-71500223 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 103, 57 |
| Conread position: | 445-665 |
| Cow position: | chr3:73154830-73155056 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 103, 57 |
| Conread position: | 445-668 |
| Cow position: | chr3:75619069-75618848 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 162, 60 |
| Conread position: | 453-691 |
| Cow position: | chr3:1022120-1022358 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 105, 21 |
| Conread position: | 457-665 |
| Cow position: | chr3:59577608-59577392 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 76, 48 |
| Conread position: | 480-664 |
| Cow position: | chr3:26382352-26382165 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 70, 25 |
| Conread position: | 480-665 |
| Cow position: | chr3:58637132-58637311 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 67, 27 |
| Conread position: | 481-644 |
| Cow position: | chr3:12613821-12613651 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 67, 24 |
| Conread position: | 481-663 |
| Cow position: | chr3:9431194-9431378 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 124, 24 |
| Conread position: | 481-665 |
| Cow position: | chr3:9631558-9631368 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 67, 10 |
| Conread position: | 481-665 |
| Cow position: | chr3:38333546-38333354 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 481-668 |
| Cow position: | chr3:8529110-8528921 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 128, 24 |
| Conread position: | 481-669 |
| Cow position: | chr3:47471285-47471095 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 92, 21 |
| Conread position: | 481-688 |
| Cow position: | chr3:62021830-62021625 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 67, 24 |
| Conread position: | 493-644 |
| Cow position: | chr3:15566459-15566614 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 12 |
| Conread position: | 494-647 |
| Cow position: | chr3:53193034-53193190 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 494-665 |
| Cow position: | chr3:53245949-53245772 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 54, 11 |
| Conread position: | 494-668 |
| Cow position: | chr3:60284260-60284079 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 503-690 |
| Cow position: | chr3:29553041-29552850 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 57, 15 |
| Conread position: | 505-702 |
| Cow position: | chr3:59628129-59627931 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 508-655 |
| Cow position: | chr3:14811346-14811491 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 36, 49 |
| Conread position: | 508-663 |
| Cow position: | chr3:72592866-72592715 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 508-665 |
| Cow position: | chr3:52691222-52691379 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 40, 23 |
| Conread position: | 527-665 |
| Cow position: | chr3:44895774-44895630 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 21, 32 |
Show alignments to all cow chromosomes.