Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8026N16.3 |
| Conread position: | 430-675 |
| Cow position: | chr6:12924922-12925171 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 433-665 |
| Cow position: | chr6:28182128-28181895 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 441-662 |
| Cow position: | chr6:53392355-53392133 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 107, 11 |
| Conread position: | 445-665 |
| Cow position: | chr6:12849822-12850047 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 99, 60 |
| Conread position: | 445-690 |
| Cow position: | chr6:1525434-1525686 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 76, 43 |
| Conread position: | 448-602 |
| Cow position: | chr6:8367516-8367360 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 100, 57 |
| Conread position: | 448-665 |
| Cow position: | chr6:35235904-35236126 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 100, 57 |
| Conread position: | 448-675 |
| Cow position: | chr6:35273854-35273623 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 78, 54 |
| Conread position: | 452-657 |
| Cow position: | chr6:138019-138229 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 452-660 |
| Cow position: | chr6:3559428-3559222 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 80, 20 |
| Conread position: | 453-665 |
| Cow position: | chr6:50875493-50875698 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 120, 47 |
| Conread position: | 469-609 |
| Cow position: | chr6:34575378-34575519 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 81, 36 |
| Conread position: | 473-665 |
| Cow position: | chr6:19436627-19436820 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 54, 32 |
| Conread position: | 480-664 |
| Cow position: | chr6:1438090-1437911 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 481-610 |
| Cow position: | chr6:68275234-68275105 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 481-665 |
| Cow position: | chr6:9821227-9821413 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 78, 21 |
| Conread position: | 481-665 |
| Cow position: | chr6:62096152-62096334 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 63, 26 |
| Conread position: | 481-668 |
| Cow position: | chr6:38791236-38791045 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 481-688 |
| Cow position: | chr6:49964771-49964972 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 482-644 |
| Cow position: | chr6:7029409-7029253 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 75, 23 |
| Conread position: | 482-663 |
| Cow position: | chr6:11755559-11755743 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 23 |
| Conread position: | 483-663 |
| Cow position: | chr6:57370330-57370517 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 65, 22 |
| Conread position: | 483-664 |
| Cow position: | chr6:9416461-9416274 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 49, 19 |
| Conread position: | 483-665 |
| Cow position: | chr6:6663779-6663967 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 22 |
| Conread position: | 483-668 |
| Cow position: | chr6:6382436-6382628 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 61, 22 |
| Conread position: | 483-668 |
| Cow position: | chr6:46657603-46657412 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 22 |
| Conread position: | 490-665 |
| Cow position: | chr6:49494267-49494085 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 58, 15 |
| Conread position: | 491-665 |
| Cow position: | chr6:54051228-54051061 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 492-675 |
| Cow position: | chr6:49221616-49221803 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 501-675 |
| Cow position: | chr6:44703931-44703745 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 502-665 |
| Cow position: | chr6:12499556-12499724 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 30, 48 |
| Conread position: | 503-662 |
| Cow position: | chr6:8140372-8140209 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 102, 47 |
| Conread position: | 503-665 |
| Cow position: | chr6:6348635-6348466 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 51 |
| Conread position: | 508-675 |
| Cow position: | chr6:51082579-51082752 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.