Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8026N16.3 |
| Conread position: | 430-662 |
| Cow position: | chr9:38755685-38755917 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 114, 12 |
| Conread position: | 432-620 |
| Cow position: | chr9:23866991-23866799 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 113, 13 |
| Conread position: | 433-663 |
| Cow position: | chr9:44688802-44688572 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 97, 19 |
| Conread position: | 436-665 |
| Cow position: | chr9:45376084-45375842 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 96, 70 |
| Conread position: | 441-668 |
| Cow position: | chr9:33247648-33247881 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 441-675 |
| Cow position: | chr9:43325238-43325477 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 107, 16 |
| Conread position: | 445-665 |
| Cow position: | chr9:24111972-24111753 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 103, 56 |
| Conread position: | 445-668 |
| Cow position: | chr9:1499020-1498791 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 103, 37 |
| Conread position: | 453-671 |
| Cow position: | chr9:37256996-37256789 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 95, 35 |
| Conread position: | 474-665 |
| Cow position: | chr9:37409616-37409812 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 8, 32 |
| Conread position: | 478-668 |
| Cow position: | chr9:8077-8263 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 70, 27 |
| Conread position: | 480-644 |
| Cow position: | chr9:30056894-30056727 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 123, 25 |
| Conread position: | 480-668 |
| Cow position: | chr9:10577894-10577706 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 125, 25 |
| Conread position: | 480-686 |
| Cow position: | chr9:55623599-55623388 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 70, 30 |
| Conread position: | 481-675 |
| Cow position: | chr9:52422764-52422569 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 111, 24 |
| Conread position: | 481-690 |
| Cow position: | chr9:4511867-4511660 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 61, 24 |
| Conread position: | 483-688 |
| Cow position: | chr9:37516375-37516170 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 65, 19 |
| Conread position: | 487-663 |
| Cow position: | chr9:53112823-53113008 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 18 |
| Conread position: | 494-644 |
| Cow position: | chr9:29001688-29001531 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 11 |
| Conread position: | 494-665 |
| Cow position: | chr9:26520844-26521016 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 11 |
| Conread position: | 503-665 |
| Cow position: | chr9:46843755-46843913 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 503-668 |
| Cow position: | chr9:12851603-12851431 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 55 |
| Conread position: | 504-679 |
| Cow position: | chr9:27920729-27920903 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 44, 23 |
| Conread position: | 507-680 |
| Cow position: | chr9:14047737-14047557 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 48 |
| Conread position: | 508-662 |
| Cow position: | chr9:29008237-29008398 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 47, 40 |
| Conread position: | 508-663 |
| Cow position: | chr9:14863062-14862906 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 94, 45 |
| Conread position: | 510-665 |
| Cow position: | chr9:38433270-38433110 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 143 |
| Conread position: | 533-665 |
| Cow position: | chr9:7778109-7777976 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 34 |
Show alignments to all cow chromosomes.