Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8026N16.3 |
| Conread position: | 431-644 |
| Cow position: | chrX:2061015-2060807 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 117, 21 |
| Conread position: | 433-686 |
| Cow position: | chrX:10257289-10257554 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 115, 19 |
| Conread position: | 434-665 |
| Cow position: | chrX:20875247-20875017 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 441-665 |
| Cow position: | chrX:13035726-13035951 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 12 |
| Conread position: | 442-665 |
| Cow position: | chrX:16885503-16885726 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 102, 11 |
| Conread position: | 444-665 |
| Cow position: | chrX:1176890-1177124 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 104, 26 |
| Conread position: | 448-665 |
| Cow position: | chrX:36067310-36067086 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 17, 41 |
| Conread position: | 449-607 |
| Cow position: | chrX:4436124-4436279 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 98, 56 |
| Conread position: | 481-665 |
| Cow position: | chrX:21835379-21835564 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 75, 21 |
| Conread position: | 481-665 |
| Cow position: | chrX:28127980-28128168 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 481-668 |
| Cow position: | chrX:11691868-11692059 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 67, 26 |
| Conread position: | 485-657 |
| Cow position: | chrX:3524088-3524265 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 63, 20 |
| Conread position: | 490-681 |
| Cow position: | chrX:2874347-2874541 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 67, 17 |
| Conread position: | 494-665 |
| Cow position: | chrX:16953954-16953778 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 54, 11 |
| Conread position: | 494-665 |
| Cow position: | chrX:39353403-39353231 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 110, 13 |
| Conread position: | 494-668 |
| Cow position: | chrX:4265075-4265256 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 11 |
| Conread position: | 506-644 |
| Cow position: | chrX:11791583-11791439 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 54, 59 |
| Conread position: | 508-665 |
| Cow position: | chrX:37148534-37148693 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 40, 50 |
| Conread position: | 508-668 |
| Cow position: | chrX:25487487-25487332 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 42, 51 |
Show alignments to all cow chromosomes.