Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8028P01.5 |
| Conread position: | 419-841 |
| Cow position: | chr11:39558263-39557834 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 296 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 19, 182 |
| Conread position: | 422-849 |
| Cow position: | chr11:77610274-77609854 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 22, 77 |
| Conread position: | 443-826 |
| Cow position: | chr11:50157776-50157415 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 58 |
| Conread position: | 443-848 |
| Cow position: | chr11:10080678-10080259 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 271 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 35, 92 |
| Conread position: | 451-851 |
| Cow position: | chr11:26754226-26754643 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 61, 175 |
| Conread position: | 456-848 |
| Cow position: | chr11:9477780-9477379 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 71, 28 |
| Conread position: | 456-851 |
| Cow position: | chr11:56705428-56705021 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 23, 198 |
| Conread position: | 477-763 |
| Cow position: | chr11:18499529-18499809 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 82, 9 |
| Conread position: | 506-845 |
| Cow position: | chr11:22321357-22321691 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 69, 78 |
| Conread position: | 511-850 |
| Cow position: | chr11:84791768-84792112 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 64, 111 |
| Conread position: | 512-844 |
| Cow position: | chr11:83571861-83571528 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 48, 86 |
| Conread position: | 636-850 |
| Cow position: | chr11:25815800-25815583 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 125, 31 |
| Conread position: | 664-849 |
| Cow position: | chr11:43638422-43638244 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 140, 7 |
| Conread position: | 665-849 |
| Cow position: | chr11:24000300-24000477 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 97, 33 |
| Conread position: | 667-850 |
| Cow position: | chr11:59704874-59705060 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 98, 25 |
| Conread position: | 667-851 |
| Cow position: | chr11:55737889-55738070 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 130, 51 |
| Conread position: | 670-848 |
| Cow position: | chr11:22316955-22316778 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 92, 67 |
| Conread position: | 672-851 |
| Cow position: | chr11:69113767-69113583 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 55, 64 |
| Conread position: | 674-851 |
| Cow position: | chr11:44050271-44050093 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 90, 59 |
| Conread position: | 685-845 |
| Cow position: | chr11:54739192-54739351 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 77, 52 |
Show alignments to all cow chromosomes.