Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8028P01.5 |
| Conread position: | 396-851 |
| Cow position: | chr18:28595618-28596094 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 319 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 16, 123 |
| Conread position: | 416-851 |
| Cow position: | chr18:49499243-49499677 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 286 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 28, 217 |
| Conread position: | 422-851 |
| Cow position: | chr18:7556356-7556765 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 42 |
| Conread position: | 423-841 |
| Cow position: | chr18:22363402-22363818 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 17, 142 |
| Conread position: | 437-851 |
| Cow position: | chr18:1968498-1968074 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 37 |
| Conread position: | 476-785 |
| Cow position: | chr18:32892930-32893221 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 98, 78 |
| Conread position: | 513-851 |
| Cow position: | chr18:19567010-19566661 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 65, 18 |
| Conread position: | 521-851 |
| Cow position: | chr18:56333436-56333766 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 54, 43 |
| Conread position: | 526-848 |
| Cow position: | chr18:4838550-4838224 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 534-851 |
| Cow position: | chr18:19294854-19295168 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 104 |
| Conread position: | 664-851 |
| Cow position: | chr18:2272780-2272972 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 5, 81 |
| Conread position: | 666-851 |
| Cow position: | chr18:39425102-39425288 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 93, 27 |
| Conread position: | 667-844 |
| Cow position: | chr18:50743270-50743450 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 95, 59 |
| Conread position: | 667-848 |
| Cow position: | chr18:30719541-30719356 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 63 |
| Conread position: | 667-850 |
| Cow position: | chr18:48935915-48936089 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 61 |
| Conread position: | 667-851 |
| Cow position: | chr18:11652497-11652683 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 99, 31 |
| Conread position: | 667-851 |
| Cow position: | chr18:49042379-49042575 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 669-851 |
| Cow position: | chr18:30785061-30785246 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 93, 59 |
| Conread position: | 670-850 |
| Cow position: | chr18:18898840-18898657 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 95, 58 |
| Conread position: | 683-841 |
| Cow position: | chr18:17385601-17385440 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 36 |
| Conread position: | 684-851 |
| Cow position: | chr18:2260393-2260221 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 78, 60 |
Show alignments to all cow chromosomes.