Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8028P01.5
        

               Conread position:
               411-832
               

               Cow position:
               chr20:13402443-13402870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               104, 31
               

               Conread position:
               421-851
               

               Cow position:
               chr20:24124223-24124638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               141, 180
               

               Conread position:
               433-851
               

               Cow position:
               chr20:27724326-27724758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               292
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               11, 65
               

               Conread position:
               443-848
               

               Cow position:
               chr20:1710789-1710403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               281
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               33, 147
               

               Conread position:
               469-849
               

               Cow position:
               chr20:5111999-5112366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               262
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               106, 51
               

               Conread position:
               476-802
               

               Cow position:
               chr20:1856339-1856651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               59, 51
               

               Conread position:
               642-851
               

               Cow position:
               chr20:26487273-26487066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               110, 25
               

               Conread position:
               664-849
               

               Cow position:
               chr20:6176727-6176542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 137
               

               Conread position:
               664-851
               

               Cow position:
               chr20:5653470-5653277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               27, 79
               

               Conread position:
               666-851
               

               Cow position:
               chr20:21472410-21472600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 18
               

               Conread position:
               669-851
               

               Cow position:
               chr20:12232351-12232172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               6, 67
               

               Conread position:
               679-847
               

               Cow position:
               chr20:2160885-2160713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               80, 49
               
Show alignments to all cow chromosomes.