Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8028P01.5
        

               Conread position:
               415-841
               

               Cow position:
               chr21:9380689-9380263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               286
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               30, 93
               

               Conread position:
               417-851
               

               Cow position:
               chr21:36170590-36170152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               298
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               26, 52
               

               Conread position:
               436-845
               

               Cow position:
               chr21:1608546-1608121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               280
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               43, 7
               

               Conread position:
               443-851
               

               Cow position:
               chr21:1301900-1302322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               71, 29
               

               Conread position:
               490-851
               

               Cow position:
               chr21:1064250-1064596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               252
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               63, 13
               

               Conread position:
               505-850
               

               Cow position:
               chr21:41516522-41516851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               97, 26
               

               Conread position:
               531-851
               

               Cow position:
               chr21:24305952-24306284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               43, 18
               

               Conread position:
               641-851
               

               Cow position:
               chr21:23885902-23885692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               126, 7
               

               Conread position:
               655-850
               

               Cow position:
               chr21:30057942-30057743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               101, 57
               

               Conread position:
               672-851
               

               Cow position:
               chr21:24744339-24744524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               89, 71
               

               Conread position:
               683-851
               

               Cow position:
               chr21:14471855-14472027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               90, 60
               
Show alignments to all cow chromosomes.