Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8028P01.5 |
| Conread position: | 369-834 |
| Cow position: | chrX:41389707-41390155 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 67, 17 |
| Conread position: | 421-785 |
| Cow position: | chrX:24920578-24920221 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 23, 100 |
| Conread position: | 421-851 |
| Cow position: | chrX:8931709-8931267 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 29, 48 |
| Conread position: | 430-851 |
| Cow position: | chrX:25285273-25284845 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 150 |
| Conread position: | 435-851 |
| Cow position: | chrX:11035069-11034645 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 33 |
| Conread position: | 435-851 |
| Cow position: | chrX:25379725-25379322 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 51, 93 |
| Conread position: | 443-851 |
| Cow position: | chrX:23917346-23917742 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 284 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 36, 140 |
| Conread position: | 464-847 |
| Cow position: | chrX:42006446-42006044 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 23, 218 |
| Conread position: | 518-848 |
| Cow position: | chrX:22861656-22861320 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 57, 35 |
| Conread position: | 521-851 |
| Cow position: | chrX:35846740-35846409 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 109, 70 |
| Conread position: | 534-851 |
| Cow position: | chrX:23078138-23078456 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 41, 29 |
| Conread position: | 664-849 |
| Cow position: | chrX:33702409-33702601 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 8, 75 |
| Conread position: | 664-851 |
| Cow position: | chrX:27518391-27518582 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 10, 31 |
| Conread position: | 665-796 |
| Cow position: | chrX:5596916-5597046 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 666-851 |
| Cow position: | chrX:799816-799626 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 99, 16 |
| Conread position: | 667-849 |
| Cow position: | chrX:23367674-23367489 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 94, 76 |
| Conread position: | 690-851 |
| Cow position: | chrX:34388725-34388890 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 72, 13 |
| Conread position: | 695-840 |
| Cow position: | chrX:11328364-11328216 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 31 |
Show alignments to all cow chromosomes.