Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8029F03.3 |
| Conread position: | 1-141 |
| Cow position: | chr24:14870425-14870559 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 2-135 |
| Cow position: | chr24:17957630-17957762 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 2-154 |
| Cow position: | chr24:19184066-19183914 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-123 |
| Cow position: | chr24:36299312-36299190 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 3-139 |
| Cow position: | chr24:12107665-12107801 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-139 |
| Cow position: | chr24:14382729-14382866 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 3-139 |
| Cow position: | chr24:41004389-41004250 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 3-140 |
| Cow position: | chr24:5991263-5991400 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-140 |
| Cow position: | chr24:17322576-17322439 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-154 |
| Cow position: | chr24:146709-146861 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 3-154 |
| Cow position: | chr24:209109-209259 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 3-154 |
| Cow position: | chr24:6411378-6411228 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 3-154 |
| Cow position: | chr24:6962850-6963000 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 3-154 |
| Cow position: | chr24:9090160-9090311 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-154 |
| Cow position: | chr24:11151226-11151374 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 64 |
| Conread position: | 3-154 |
| Cow position: | chr24:12127210-12127360 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 3-154 |
| Cow position: | chr24:13043727-13043877 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 3-154 |
| Cow position: | chr24:13190064-13189914 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 3-154 |
| Cow position: | chr24:13234148-13233999 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 3-154 |
| Cow position: | chr24:16082600-16082750 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 3-154 |
| Cow position: | chr24:16560409-16560560 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 32, 130 |
| Conread position: | 3-154 |
| Cow position: | chr24:17410359-17410209 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 3-154 |
| Cow position: | chr24:19468708-19468858 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 3-154 |
| Cow position: | chr24:19835304-19835157 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 3-154 |
| Cow position: | chr24:20286012-20286162 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 3-154 |
| Cow position: | chr24:22972965-22972815 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 3-154 |
| Cow position: | chr24:23094126-23094274 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 113, 63 |
| Conread position: | 3-154 |
| Cow position: | chr24:23096864-23097013 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 3-154 |
| Cow position: | chr24:23503959-23504109 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 3-154 |
| Cow position: | chr24:25438502-25438352 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 3-154 |
| Cow position: | chr24:29189187-29189037 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 102 |
| Conread position: | 3-154 |
| Cow position: | chr24:33935288-33935138 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 3-154 |
| Cow position: | chr24:36557670-36557820 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 3-154 |
| Cow position: | chr24:40469074-40468922 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 37, 139 |
| Conread position: | 3-154 |
| Cow position: | chr24:40550523-40550373 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 3-155 |
| Cow position: | chr24:7063440-7063290 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 3-157 |
| Cow position: | chr24:12088100-12087947 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 3-157 |
| Cow position: | chr24:14755899-14755746 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 4-154 |
| Cow position: | chr24:9073426-9073574 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 142, 35 |
| Conread position: | 4-178 |
| Cow position: | chr24:17300010-17300185 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 130 |
| Conread position: | 5-154 |
| Cow position: | chr24:12333840-12333989 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.