Cow genome map
Conread name: | Ss1.1-Pig4-TMW8029F03.3 |
Conread position: | 1-154 |
Cow position: | chr29:16014478-16014626 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 118 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 2-140 |
Cow position: | chr29:17152076-17151939 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 131, 0 |
Conread position: | 2-140 |
Cow position: | chr29:40612052-40612187 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 107 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 2-154 |
Cow position: | chr29:12794303-12794154 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 117 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 2-154 |
Cow position: | chr29:13018515-13018364 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 111 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 3-152 |
Cow position: | chr29:22951351-22951499 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 109 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 3-152 |
Cow position: | chr29:29617484-29617629 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 114 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 32, 64 |
Conread position: | 3-152 |
Cow position: | chr29:36596255-36596398 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 112 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 3-154 |
Cow position: | chr29:46638-46787 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 117 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 3-154 |
Cow position: | chr29:409438-409588 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 116 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 3-154 |
Cow position: | chr29:608824-608974 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 116 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 3-154 |
Cow position: | chr29:2101662-2101513 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 118 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 3-154 |
Cow position: | chr29:2465052-2465202 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 110 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 3-154 |
Cow position: | chr29:2691986-2691836 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 117 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 137, 0 |
Conread position: | 3-154 |
Cow position: | chr29:2839517-2839669 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 121 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 129, 76 |
Conread position: | 3-154 |
Cow position: | chr29:5236848-5236695 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 119 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 3-154 |
Cow position: | chr29:6264175-6264326 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 119 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 99, 130 |
Conread position: | 3-154 |
Cow position: | chr29:7429296-7429446 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 121 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 3-154 |
Cow position: | chr29:7846214-7846064 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 117 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 3-154 |
Cow position: | chr29:9640960-9641111 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 116 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 37, 130 |
Conread position: | 3-154 |
Cow position: | chr29:10022508-10022658 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 116 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 3-154 |
Cow position: | chr29:10645587-10645737 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 118 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 137, 0 |
Conread position: | 3-154 |
Cow position: | chr29:10822097-10822248 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 113 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 117, 21 |
Conread position: | 3-154 |
Cow position: | chr29:13583905-13583755 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 114 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 3-154 |
Cow position: | chr29:13622034-13622184 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 3-154 |
Cow position: | chr29:14209728-14209878 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 137, 0 |
Conread position: | 3-154 |
Cow position: | chr29:15624901-15625048 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 116 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 3-154 |
Cow position: | chr29:16024387-16024237 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 3-154 |
Cow position: | chr29:16688656-16688509 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 3-154 |
Cow position: | chr29:19526462-19526612 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 3-154 |
Cow position: | chr29:19621443-19621598 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 122 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 3-154 |
Cow position: | chr29:19655442-19655292 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 3-154 |
Cow position: | chr29:19889407-19889260 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 116 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 123, 0 |
Conread position: | 3-154 |
Cow position: | chr29:21431031-21431178 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 3-154 |
Cow position: | chr29:23977947-23977797 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 3-154 |
Cow position: | chr29:25930695-25930847 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 119 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 129, 27 |
Conread position: | 3-154 |
Cow position: | chr29:26163012-26163159 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 117 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 3-154 |
Cow position: | chr29:27179929-27180079 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 116 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 3-154 |
Cow position: | chr29:27261357-27261507 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 112 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 3-154 |
Cow position: | chr29:31095754-31095904 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 112 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 3-154 |
Cow position: | chr29:31183226-31183076 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 3-154 |
Cow position: | chr29:32541919-32541768 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 119 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 37, 130 |
Conread position: | 3-154 |
Cow position: | chr29:32557927-32558077 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 109 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 3-154 |
Cow position: | chr29:34797987-34798137 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 119 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 75, 43 |
Conread position: | 3-154 |
Cow position: | chr29:35298734-35298584 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 114 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 3-154 |
Cow position: | chr29:38206840-38206990 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 3-154 |
Cow position: | chr29:39077888-39078037 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 116 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 3-154 |
Cow position: | chr29:40501186-40501333 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 3-154 |
Cow position: | chr29:45206354-45206204 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 3-156 |
Cow position: | chr29:13851054-13851206 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 119 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 19, 14 |
Conread position: | 4-137 |
Cow position: | chr29:4517423-4517290 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 105 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-154 |
Cow position: | chr29:9082063-9082213 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 111 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 36, 129 |
Conread position: | 4-154 |
Cow position: | chr29:32288069-32287920 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 56, 65 |
Conread position: | 5-154 |
Cow position: | chr29:38228799-38228651 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 127, 0 |
Conread position: | 5-157 |
Cow position: | chr29:8625373-8625523 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 121 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 127, 0 |
Conread position: | 8-154 |
Cow position: | chr29:27812902-27812757 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 112 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 125, 0 |
Conread position: | 17-150 |
Cow position: | chr29:647617-647484 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 100 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 20-154 |
Cow position: | chr29:43325324-43325190 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 102 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 68, 113 |
Show alignments to all cow chromosomes.