Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8029F03.3 |
| Conread position: | 1-137 |
| Cow position: | chr8:18054790-18054657 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-154 |
| Cow position: | chr8:6725926-6726076 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 45, 133 |
| Conread position: | 2-140 |
| Cow position: | chr8:24870420-24870559 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 2-154 |
| Cow position: | chr8:11803872-11803722 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 2-154 |
| Cow position: | chr8:16090894-16090743 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 3-130 |
| Cow position: | chr8:36786747-36786874 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-135 |
| Cow position: | chr8:21205599-21205467 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-140 |
| Cow position: | chr8:8516539-8516675 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 3-140 |
| Cow position: | chr8:21156731-21156868 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-140 |
| Cow position: | chr8:47674896-47674759 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-140 |
| Cow position: | chr8:53902856-53902719 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-152 |
| Cow position: | chr8:14589817-14589966 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-152 |
| Cow position: | chr8:23772693-23772545 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:1321077-1320927 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:1347190-1347340 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:2168459-2168610 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 123 |
| Conread position: | 3-154 |
| Cow position: | chr8:3748141-3748290 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:3786690-3786540 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:3854964-3855114 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:4688461-4688310 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 3-154 |
| Cow position: | chr8:8400042-8400194 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 39, 131 |
| Conread position: | 3-154 |
| Cow position: | chr8:9943866-9944016 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:10741586-10741735 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:10750407-10750257 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:11776678-11776528 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 122, 112 |
| Conread position: | 3-154 |
| Cow position: | chr8:12451101-12450952 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:14257140-14256990 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:14926825-14926974 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 121, 36 |
| Conread position: | 3-154 |
| Cow position: | chr8:21251286-21251136 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:22570244-22570394 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:24191026-24190876 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:24914261-24914411 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:25524452-25524302 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:29923291-29923440 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:32317494-32317646 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 119, 131 |
| Conread position: | 3-154 |
| Cow position: | chr8:32436016-32436169 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 93, 142 |
| Conread position: | 3-154 |
| Cow position: | chr8:32629973-32630123 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:33326111-33325961 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:34349731-34349581 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:35471362-35471212 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:36634444-36634598 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 22, 104 |
| Conread position: | 3-154 |
| Cow position: | chr8:37655495-37655645 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:39820512-39820362 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:41643626-41643776 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:42428444-42428594 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:44701042-44700892 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 37, 131 |
| Conread position: | 3-154 |
| Cow position: | chr8:45357503-45357650 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:45793696-45793844 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:47067760-47067906 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:47660261-47660411 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:47887904-47887754 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:49218802-49218650 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:50929045-50929195 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:50995847-50995697 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:51067937-51068087 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:59260888-59261038 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:60062469-60062319 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:60920864-60920714 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 3-154 |
| Cow position: | chr8:61033412-61033263 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 3-157 |
| Cow position: | chr8:12313343-12313496 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 3-157 |
| Cow position: | chr8:25774587-25774741 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-157 |
| Cow position: | chr8:42485968-42485817 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 3-157 |
| Cow position: | chr8:44241631-44241784 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 4-139 |
| Cow position: | chr8:49294998-49295128 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 4-140 |
| Cow position: | chr8:18210396-18210530 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 62 |
| Conread position: | 4-154 |
| Cow position: | chr8:8912783-8912634 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 4-178 |
| Cow position: | chr8:29032914-29033087 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 5, 128 |
| Conread position: | 4-202 |
| Cow position: | chr8:5661784-5661978 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 142, 47 |
| Conread position: | 5-151 |
| Cow position: | chr8:36920407-36920264 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 5-154 |
| Cow position: | chr8:30156157-30156011 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 5-157 |
| Cow position: | chr8:45158468-45158620 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-154 |
| Cow position: | chr8:46059916-46060062 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 8-141 |
| Cow position: | chr8:55086602-55086469 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-154 |
| Cow position: | chr8:2887806-2887662 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 10-154 |
| Cow position: | chr8:25378030-25377887 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 10-154 |
| Cow position: | chr8:38392679-38392536 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 114, 0 |
Show alignments to all cow chromosomes.