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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8031F14.3
        

               
Conread position:
               
143-632
               

               
Cow position:
               
chr13:6617066-6616553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
94, 217
               

               
Conread position:
               
160-615
               

               
Cow position:
               
chr13:49823737-49824205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
77, 200
               

               
Conread position:
               
189-382
               

               
Cow position:
               
chr13:51106868-51107062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
6, 49
               

               
Conread position:
               
190-420
               

               
Cow position:
               
chr13:24094573-24094337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
47, 169
               

               
Conread position:
               
196-632
               

               
Cow position:
               
chr13:4552578-4552994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
338, 10
               

               
Conread position:
               
199-630
               

               
Cow position:
               
chr13:57494417-57493990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
112, 47
               

               
Conread position:
               
200-632
               

               
Cow position:
               
chr13:12574387-12574829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
120, 28
               

               
Conread position:
               
200-632
               

               
Cow position:
               
chr13:45023464-45023013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
201-584
               

               
Cow position:
               
chr13:26698739-26698350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
203-627
               

               
Cow position:
               
chr13:15958380-15958811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
227, 142
               

               
Conread position:
               
203-632
               

               
Cow position:
               
chr13:8362987-8362551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 28
               

               
Conread position:
               
204-412
               

               
Cow position:
               
chr13:24215919-24215702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 155
               

               
Conread position:
               
206-519
               

               
Cow position:
               
chr13:14940559-14940886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
112, 21
               

               
Conread position:
               
206-630
               

               
Cow position:
               
chr13:9587824-9587390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
207-420
               

               
Cow position:
               
chr13:55765415-55765198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 128
               

               
Conread position:
               
208-567
               

               
Cow position:
               
chr13:11260037-11260399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
16, 139
               

               
Conread position:
               
208-632
               

               
Cow position:
               
chr13:61977196-61976768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
22, 156
               

               
Conread position:
               
208-645
               

               
Cow position:
               
chr13:15289154-15288718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
105, 21
               

               
Conread position:
               
209-483
               

               
Cow position:
               
chr13:40541349-40541062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
20, 145
               

               
Conread position:
               
209-594
               

               
Cow position:
               
chr13:25537400-25537789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
209-632
               

               
Cow position:
               
chr13:21235902-21235490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
209-632
               

               
Cow position:
               
chr13:25696003-25695573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
72, 138
               

               
Conread position:
               
210-416
               

               
Cow position:
               
chr13:33054608-33054395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
109, 134
               

               
Conread position:
               
210-420
               

               
Cow position:
               
chr13:16907980-16908197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
210-445
               

               
Cow position:
               
chr13:7046645-7046879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
174, 80
               

               
Conread position:
               
211-631
               

               
Cow position:
               
chr13:34281447-34281874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
84, 168
               

               
Conread position:
               
212-453
               

               
Cow position:
               
chr13:52477877-52477632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
212-539
               

               
Cow position:
               
chr13:54128829-54128491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
109, 19
               

               
Conread position:
               
212-630
               

               
Cow position:
               
chr13:8245545-8245139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
209, 15
               

               
Conread position:
               
212-632
               

               
Cow position:
               
chr13:5263510-5263091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 19
               

               
Conread position:
               
213-405
               

               
Cow position:
               
chr13:50583051-50582859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
23, 128
               

               
Conread position:
               
213-420
               

               
Cow position:
               
chr13:9124692-9124906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 133
               

               
Conread position:
               
213-532
               

               
Cow position:
               
chr13:28291087-28291420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
213-582
               

               
Cow position:
               
chr13:18058480-18058104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
16, 234
               

               
Conread position:
               
213-609
               

               
Cow position:
               
chr13:20473906-20473515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
170, 19
               

               
Conread position:
               
213-624
               

               
Cow position:
               
chr13:55582962-55583386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
106, 134
               

               
Conread position:
               
213-631
               

               
Cow position:
               
chr13:13260763-13261202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
213-632
               

               
Cow position:
               
chr13:40490986-40491428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
108, 14
               

               
Conread position:
               
213-632
               

               
Cow position:
               
chr13:54094596-54095001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
196, 15
               

               
Conread position:
               
214-390
               

               
Cow position:
               
chr13:26377652-26377466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
214-410
               

               
Cow position:
               
chr13:37555101-37554905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
107, 18
               

               
Conread position:
               
214-421
               

               
Cow position:
               
chr13:34533158-34532949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
93, 13
               

               
Conread position:
               
214-443
               

               
Cow position:
               
chr13:25941493-25941264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
93, 43
               

               
Conread position:
               
214-540
               

               
Cow position:
               
chr13:46043945-46044260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
193, 15
               

               
Conread position:
               
214-593
               

               
Cow position:
               
chr13:28139350-28139722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 141
               

               
Conread position:
               
214-629
               

               
Cow position:
               
chr13:17745027-17745431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 102
               

               
Conread position:
               
214-632
               

               
Cow position:
               
chr13:151740-152146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
106, 18
               

               
Conread position:
               
214-632
               

               
Cow position:
               
chr13:15041706-15041277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 143
               

               
Conread position:
               
214-632
               

               
Cow position:
               
chr13:15193119-15192699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 126
               

               
Conread position:
               
215-374
               

               
Cow position:
               
chr13:2529180-2529016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
104, 16
               

               
Conread position:
               
215-418
               

               
Cow position:
               
chr13:3153518-3153728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
215-422
               

               
Cow position:
               
chr13:4965170-4965371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 124
               

               
Conread position:
               
215-623
               

               
Cow position:
               
chr13:11820930-11821328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
111, 48
               

               
Conread position:
               
215-632
               

               
Cow position:
               
chr13:20271459-20271020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 16
               

               
Conread position:
               
215-632
               

               
Cow position:
               
chr13:37069111-37069544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 136
               

               
Conread position:
               
215-632
               

               
Cow position:
               
chr13:46111738-46112162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 78
               

               
Conread position:
               
215-632
               

               
Cow position:
               
chr13:48252198-48251797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
104, 36
               

               
Conread position:
               
215-633
               

               
Cow position:
               
chr13:5279433-5278993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
215-643
               

               
Cow position:
               
chr13:13501840-13501413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
175, 13
               

               
Conread position:
               
216-315
               

               
Cow position:
               
chr13:54690137-54690236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
216-325
               

               
Cow position:
               
chr13:8555117-8555225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
103, 90
               

               
Conread position:
               
216-326
               

               
Cow position:
               
chr13:39775719-39775609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
216-383
               

               
Cow position:
               
chr13:53847350-53847178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 130
               

               
Conread position:
               
216-396
               

               
Cow position:
               
chr13:57322920-57323102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
85, 118
               

               
Conread position:
               
216-404
               

               
Cow position:
               
chr13:50565540-50565349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
93, 83
               

               
Conread position:
               
216-405
               

               
Cow position:
               
chr13:13780949-13781145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
216-405
               

               
Cow position:
               
chr13:48126875-48127073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
103, 132
               

               
Conread position:
               
216-418
               

               
Cow position:
               
chr13:28605626-28605412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
15, 145
               

               
Conread position:
               
216-420
               

               
Cow position:
               
chr13:11410478-11410694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
10, 203
               

               
Conread position:
               
216-420
               

               
Cow position:
               
chr13:21981200-21980996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 137
               

               
Conread position:
               
216-420
               

               
Cow position:
               
chr13:42302271-42302058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
101, 142
               

               
Conread position:
               
216-420
               

               
Cow position:
               
chr13:47340097-47340301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
216-449
               

               
Cow position:
               
chr13:15083432-15083672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
93, 186
               

               
Conread position:
               
216-449
               

               
Cow position:
               
chr13:15996804-15997047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
216-450
               

               
Cow position:
               
chr13:26960027-26959791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
105, 139
               

               
Conread position:
               
216-452
               

               
Cow position:
               
chr13:33962992-33962754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 55
               

               
Conread position:
               
216-487
               

               
Cow position:
               
chr13:52641181-52640902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
216-501
               

               
Cow position:
               
chr13:17823182-17822889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
31, 141
               

               
Conread position:
               
216-539
               

               
Cow position:
               
chr13:620473-620159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
112, 24
               

               
Conread position:
               
216-561
               

               
Cow position:
               
chr13:21280730-21280363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
99, 132
               

               
Conread position:
               
216-576
               

               
Cow position:
               
chr13:11321830-11321477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
216-618
               

               
Cow position:
               
chr13:5758561-5758164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 48
               

               
Conread position:
               
216-628
               

               
Cow position:
               
chr13:57475647-57475225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 138
               

               
Conread position:
               
216-629
               

               
Cow position:
               
chr13:11768256-11767850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
164, 83
               

               
Conread position:
               
216-631
               

               
Cow position:
               
chr13:10845386-10845787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
216-632
               

               
Cow position:
               
chr13:17114612-17114185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 143
               

               
Conread position:
               
216-632
               

               
Cow position:
               
chr13:20880056-20879639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 131
               

               
Conread position:
               
216-632
               

               
Cow position:
               
chr13:21242302-21241897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 13
               

               
Conread position:
               
216-632
               

               
Cow position:
               
chr13:31808293-31808707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
12, 58
               

               
Conread position:
               
216-632
               

               
Cow position:
               
chr13:37775436-37775032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
20, 130
               

               
Conread position:
               
216-632
               

               
Cow position:
               
chr13:45352796-45353241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 145
               

               
Conread position:
               
216-632
               

               
Cow position:
               
chr13:47964405-47964006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
216-632
               

               
Cow position:
               
chr13:51015416-51014985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
26, 150
               

               
Conread position:
               
216-645
               

               
Cow position:
               
chr13:18989495-18989913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
217-325
               

               
Cow position:
               
chr13:50545315-50545423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
217-386
               

               
Cow position:
               
chr13:5659995-5659821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 138
               

               
Conread position:
               
217-404
               

               
Cow position:
               
chr13:48373544-48373354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
98, 138
               

               
Conread position:
               
217-412
               

               
Cow position:
               
chr13:21246941-21246738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
102, 142
               

               
Conread position:
               
217-413
               

               
Cow position:
               
chr13:29802400-29802589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
129, 13
               

               
Conread position:
               
217-577
               

               
Cow position:
               
chr13:21269811-21269440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 141
               

               
Conread position:
               
217-582
               

               
Cow position:
               
chr13:3160174-3160536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
90, 137
               

               
Conread position:
               
217-590
               

               
Cow position:
               
chr13:18999301-18999695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
19, 135
               

               
Conread position:
               
217-593
               

               
Cow position:
               
chr13:54582646-54583033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
104, 192
               

               
Conread position:
               
217-619
               

               
Cow position:
               
chr13:19188085-19188486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
217-632
               

               
Cow position:
               
chr13:1170229-1170663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 144
               

               
Conread position:
               
217-632
               

               
Cow position:
               
chr13:15868881-15869314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
78, 135
               

               
Conread position:
               
217-632
               

               
Cow position:
               
chr13:19582310-19581892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
217-632
               

               
Cow position:
               
chr13:32282898-32283322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 31
               

               
Conread position:
               
217-632
               

               
Cow position:
               
chr13:43595331-43594920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
137, 14
               

               
Conread position:
               
217-632
               

               
Cow position:
               
chr13:51528665-51528251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
115, 15
               

               
Conread position:
               
217-632
               

               
Cow position:
               
chr13:51940515-51940926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 54
               

               
Conread position:
               
217-633
               

               
Cow position:
               
chr13:26480428-26480018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
95, 11
               

               
Conread position:
               
218-325
               

               
Cow position:
               
chr13:20654091-20653982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
218-326
               

               
Cow position:
               
chr13:52929203-52929312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
218-403
               

               
Cow position:
               
chr13:20368111-20367916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
19, 143
               

               
Conread position:
               
218-403
               

               
Cow position:
               
chr13:24107774-24107585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
218-404
               

               
Cow position:
               
chr13:17994601-17994409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 139
               

               
Conread position:
               
218-406
               

               
Cow position:
               
chr13:41115611-41115808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 143
               

               
Conread position:
               
218-407
               

               
Cow position:
               
chr13:3149660-3149462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
96, 139
               

               
Conread position:
               
218-414
               

               
Cow position:
               
chr13:45499004-45499205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
103, 96
               

               
Conread position:
               
218-419
               

               
Cow position:
               
chr13:30396490-30396688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
19, 124
               

               
Conread position:
               
218-420
               

               
Cow position:
               
chr13:54236581-54236785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
21, 50
               

               
Conread position:
               
218-425
               

               
Cow position:
               
chr13:23975393-23975183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
136, 118
               

               
Conread position:
               
218-430
               

               
Cow position:
               
chr13:28536550-28536333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 142
               

               
Conread position:
               
218-528
               

               
Cow position:
               
chr13:20137590-20137915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
103, 140
               

               
Conread position:
               
218-563
               

               
Cow position:
               
chr13:49795810-49796144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 105
               

               
Conread position:
               
218-580
               

               
Cow position:
               
chr13:20360048-20360413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
101, 143
               

               
Conread position:
               
218-586
               

               
Cow position:
               
chr13:20174512-20174899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
218-605
               

               
Cow position:
               
chr13:866907-867296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
105, 13
               

               
Conread position:
               
218-615
               

               
Cow position:
               
chr13:49023093-49022692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 240
               

               
Conread position:
               
218-624
               

               
Cow position:
               
chr13:9906501-9906930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
102, 141
               

               
Conread position:
               
218-627
               

               
Cow position:
               
chr13:1231415-1231841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
93, 136
               

               
Conread position:
               
218-631
               

               
Cow position:
               
chr13:17021951-17021526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
218-632
               

               
Cow position:
               
chr13:9975293-9974873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
138, 13
               

               
Conread position:
               
218-632
               

               
Cow position:
               
chr13:12989632-12990042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
218-632
               

               
Cow position:
               
chr13:32017745-32017327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 143
               

               
Conread position:
               
218-632
               

               
Cow position:
               
chr13:33256271-33256691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
218-632
               

               
Cow position:
               
chr13:52749691-52749293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
218-632
               

               
Cow position:
               
chr13:52893921-52894339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
219-402
               

               
Cow position:
               
chr13:1339371-1339179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 131
               

               
Conread position:
               
219-405
               

               
Cow position:
               
chr13:23805248-23805052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 142
               

               
Conread position:
               
219-412
               

               
Cow position:
               
chr13:17089739-17089546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
178, 61
               

               
Conread position:
               
219-412
               

               
Cow position:
               
chr13:41979364-41979175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 125
               

               
Conread position:
               
219-414
               

               
Cow position:
               
chr13:52464513-52464714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
101, 140
               

               
Conread position:
               
219-420
               

               
Cow position:
               
chr13:14411665-14411873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
100, 141
               

               
Conread position:
               
219-420
               

               
Cow position:
               
chr13:20042490-20042283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
107, 131
               

               
Conread position:
               
219-421
               

               
Cow position:
               
chr13:8699967-8699754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
219-421
               

               
Cow position:
               
chr13:37030122-37030325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
219-612
               

               
Cow position:
               
chr13:14016784-14016390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 48
               

               
Conread position:
               
219-633
               

               
Cow position:
               
chr13:22115449-22115900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
102, 52
               

               
Conread position:
               
220-331
               

               
Cow position:
               
chr13:10055191-10055302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
220-406
               

               
Cow position:
               
chr13:10715637-10715829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 8
               

               
Conread position:
               
220-444
               

               
Cow position:
               
chr13:57770208-57769982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 222
               

               
Conread position:
               
220-534
               

               
Cow position:
               
chr13:25978420-25978094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 231
               

               
Conread position:
               
220-590
               

               
Cow position:
               
chr13:21106920-21107291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
220-617
               

               
Cow position:
               
chr13:34375036-34375449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
220-622
               

               
Cow position:
               
chr13:10989299-10988885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
89, 138
               

               
Conread position:
               
220-632
               

               
Cow position:
               
chr13:12449207-12448793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
220-632
               

               
Cow position:
               
chr13:14063745-14063329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
95, 12
               

               
Conread position:
               
220-632
               

               
Cow position:
               
chr13:37593171-37592743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 45
               

               
Conread position:
               
220-632
               

               
Cow position:
               
chr13:43479835-43480256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
220-632
               

               
Cow position:
               
chr13:45074127-45073740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
235, 12
               

               
Conread position:
               
221-397
               

               
Cow position:
               
chr13:55007994-55007813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
92, 121
               

               
Conread position:
               
221-467
               

               
Cow position:
               
chr13:47243774-47243524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
90, 10
               

               
Conread position:
               
221-584
               

               
Cow position:
               
chr13:38697832-38698198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
221-607
               

               
Cow position:
               
chr13:9800295-9800669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
221-622
               

               
Cow position:
               
chr13:38329394-38329815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
94, 226
               

               
Conread position:
               
221-627
               

               
Cow position:
               
chr13:16247420-16247843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
97, 139
               

               
Conread position:
               
221-632
               

               
Cow position:
               
chr13:19223426-19223844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 139
               

               
Conread position:
               
222-445
               

               
Cow position:
               
chr13:10522715-10522943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 93
               

               
Conread position:
               
222-539
               

               
Cow position:
               
chr13:16038508-16038191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
15, 120
               

               
Conread position:
               
222-631
               

               
Cow position:
               
chr13:16014581-16015001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
73, 9
               

               
Conread position:
               
222-632
               

               
Cow position:
               
chr13:54701959-54702386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
99, 10
               

               
Conread position:
               
224-321
               

               
Cow position:
               
chr13:5735141-5735238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
224-389
               

               
Cow position:
               
chr13:21955291-21955116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 136
               

               
Conread position:
               
224-539
               

               
Cow position:
               
chr13:13533883-13533568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
97, 118
               

               
Conread position:
               
224-573
               

               
Cow position:
               
chr13:2803264-2803604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
14, 90
               

               
Conread position:
               
224-627
               

               
Cow position:
               
chr13:15195422-15195019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
90, 112
               

               
Conread position:
               
224-631
               

               
Cow position:
               
chr13:34507673-34508070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
224-632
               

               
Cow position:
               
chr13:12670673-12670250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
97, 53
               

               
Conread position:
               
224-632
               

               
Cow position:
               
chr13:36876845-36877267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
226-621
               

               
Cow position:
               
chr13:6540521-6540129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
11, 67
               

               
Conread position:
               
227-606
               

               
Cow position:
               
chr13:29831645-29831265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
135, 72
               

               
Conread position:
               
227-619
               

               
Cow position:
               
chr13:52055811-52055414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
87, 55
               

               
Conread position:
               
227-631
               

               
Cow position:
               
chr13:20839363-20839761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
107, 16
               

               
Conread position:
               
227-632
               

               
Cow position:
               
chr13:54382143-54381739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
9, 190
               

               
Conread position:
               
228-434
               

               
Cow position:
               
chr13:50646846-50646636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
81, 127
               

               
Conread position:
               
228-556
               

               
Cow position:
               
chr13:14575997-14576325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 126
               

               
Conread position:
               
228-580
               

               
Cow position:
               
chr13:28552368-28552739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
8, 118
               

               
Conread position:
               
228-583
               

               
Cow position:
               
chr13:8374977-8374626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
186, 8
               

               
Conread position:
               
228-603
               

               
Cow position:
               
chr13:20579700-20580075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
8, 42
               

               
Conread position:
               
228-630
               

               
Cow position:
               
chr13:40722913-40722516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
228-631
               

               
Cow position:
               
chr13:35659537-35659947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
41, 167
               

               
Conread position:
               
228-631
               

               
Cow position:
               
chr13:52283691-52284103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
228-632
               

               
Cow position:
               
chr13:1155923-1155513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
228-632
               

               
Cow position:
               
chr13:6079620-6079224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 80
               

               
Conread position:
               
228-632
               

               
Cow position:
               
chr13:7059240-7059670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
8, 134
               

               
Conread position:
               
228-632
               

               
Cow position:
               
chr13:12876194-12875790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
8, 132
               

               
Conread position:
               
228-632
               

               
Cow position:
               
chr13:34261017-34261427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 116
               

               
Conread position:
               
228-632
               

               
Cow position:
               
chr13:42113797-42114216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
8, 189
               

               
Conread position:
               
228-632
               

               
Cow position:
               
chr13:43139417-43139030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
8, 71
               

               
Conread position:
               
228-645
               

               
Cow position:
               
chr13:10925141-10924696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 123
               

               
Conread position:
               
229-632
               

               
Cow position:
               
chr13:20821053-20820645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
76, 200
               

               
Conread position:
               
232-392
               

               
Cow position:
               
chr13:34300061-34299907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 60
               

               
Conread position:
               
232-395
               

               
Cow position:
               
chr13:37946599-37946434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 120
               

               
Conread position:
               
232-405
               

               
Cow position:
               
chr13:28376775-28376595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
87, 114
               

               
Conread position:
               
232-412
               

               
Cow position:
               
chr13:16163375-16163553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 34
               

               
Conread position:
               
232-412
               

               
Cow position:
               
chr13:20535493-20535670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 84
               

               
Conread position:
               
232-413
               

               
Cow position:
               
chr13:28695645-28695832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
87, 32
               

               
Conread position:
               
232-420
               

               
Cow position:
               
chr13:49356262-49356069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
75, 123
               

               
Conread position:
               
232-421
               

               
Cow position:
               
chr13:27028118-27027915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
72, 115
               

               
Conread position:
               
232-438
               

               
Cow position:
               
chr13:47676150-47675941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
87, 125
               

               
Conread position:
               
232-474
               

               
Cow position:
               
chr13:17813258-17813504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 119
               

               
Conread position:
               
232-505
               

               
Cow position:
               
chr13:62007894-62008178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 114
               

               
Conread position:
               
232-513
               

               
Cow position:
               
chr13:7149712-7149437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
175, 35
               

               
Conread position:
               
232-531
               

               
Cow position:
               
chr13:56035070-56034765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
77, 110
               

               
Conread position:
               
232-563
               

               
Cow position:
               
chr13:17438075-17437742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
49, 115
               

               
Conread position:
               
232-582
               

               
Cow position:
               
chr13:44003486-44003864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
232-588
               

               
Cow position:
               
chr13:25604818-25604475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
266, 11
               

               
Conread position:
               
232-590
               

               
Cow position:
               
chr13:45593710-45594056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
81, 121
               

               
Conread position:
               
232-613
               

               
Cow position:
               
chr13:607476-607085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 200
               

               
Conread position:
               
232-628
               

               
Cow position:
               
chr13:22085945-22085560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
151, 29
               

               
Conread position:
               
232-631
               

               
Cow position:
               
chr13:21275643-21276049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 47
               

               
Conread position:
               
232-631
               

               
Cow position:
               
chr13:23667044-23667453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
81, 29
               

               
Conread position:
               
232-631
               

               
Cow position:
               
chr13:55674423-55674011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
76, 230
               

               
Conread position:
               
232-631
               

               
Cow position:
               
chr13:60509338-60508922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 128
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr13:2192524-2192903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
180, 39
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr13:2773902-2774319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
88, 127
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr13:7076027-7076451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 132
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr13:13088819-13089219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
89, 221
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr13:17855154-17855569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
92, 130
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr13:18166519-18166925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 180
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr13:19033342-19033741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 126
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr13:19883247-19882840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 132
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr13:20497429-20497847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
86, 128
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr13:21288298-21287895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
83, 141
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr13:23512167-23512554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
34, 91
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr13:24715036-24715437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 80
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr13:25817316-25817708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
83, 155
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr13:30650972-30651370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
92, 128
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr13:33875459-33875857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 128
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr13:42200407-42200814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 109
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr13:42860780-42860375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr13:60600149-60599747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 130
               

               
Conread position:
               
232-633
               

               
Cow position:
               
chr13:18851875-18852272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
88, 67
               

               
Conread position:
               
232-650
               

               
Cow position:
               
chr13:17159095-17158658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 119
               

               
Conread position:
               
233-403
               

               
Cow position:
               
chr13:16476641-16476820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
86, 115
               

               
Conread position:
               
233-435
               

               
Cow position:
               
chr13:24796671-24796871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
90, 30
               

               
Conread position:
               
233-472
               

               
Cow position:
               
chr13:52341745-52341989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
233-624
               

               
Cow position:
               
chr13:20509515-20509919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 131
               

               
Conread position:
               
233-631
               

               
Cow position:
               
chr13:311220-311624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
83, 174
               

               
Conread position:
               
233-632
               

               
Cow position:
               
chr13:15445837-15446241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
159, 58
               

               
Conread position:
               
233-632
               

               
Cow position:
               
chr13:34729053-34728642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
76, 33
               

               
Conread position:
               
234-392
               

               
Cow position:
               
chr13:40483191-40483026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
85, 122
               

               
Conread position:
               
234-405
               

               
Cow position:
               
chr13:17958629-17958801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
89, 121
               

               
Conread position:
               
234-487
               

               
Cow position:
               
chr13:1147362-1147103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
93, 226
               

               
Conread position:
               
234-632
               

               
Cow position:
               
chr13:20784383-20784783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 223
               

               
Conread position:
               
234-632
               

               
Cow position:
               
chr13:47007924-47007541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
87, 80
               

               
Conread position:
               
235-632
               

               
Cow position:
               
chr13:27525469-27525066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
235-632
               

               
Cow position:
               
chr13:53195485-53195097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
86, 30
               

               
Conread position:
               
235-632
               

               
Cow position:
               
chr13:60966569-60966959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
89, 48
               

               
Conread position:
               
236-560
               

               
Cow position:
               
chr13:1568725-1569046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
57, 96
               

               
Conread position:
               
236-621
               

               
Cow position:
               
chr13:13320588-13320964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
85, 221
               

               
Conread position:
               
236-629
               

               
Cow position:
               
chr13:12233645-12233265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
178, 56
               

               
Conread position:
               
236-630
               

               
Cow position:
               
chr13:25926579-25926985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 121
               

               
Conread position:
               
236-630
               

               
Cow position:
               
chr13:44201800-44202182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
71, 102
               

               
Conread position:
               
236-631
               

               
Cow position:
               
chr13:6973953-6974354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 109
               

               
Conread position:
               
236-631
               

               
Cow position:
               
chr13:35526403-35526023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
120, 29
               

               
Conread position:
               
236-632
               

               
Cow position:
               
chr13:4665059-4664667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
257, 84
               

               
Conread position:
               
236-632
               

               
Cow position:
               
chr13:15621600-15622002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
61, 110
               

               
Conread position:
               
236-632
               

               
Cow position:
               
chr13:19393087-19393482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 33
               

               
Conread position:
               
236-632
               

               
Cow position:
               
chr13:25435315-25434934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
169, 63
               

               
Conread position:
               
236-632
               

               
Cow position:
               
chr13:59170435-59170852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
69, 132
               

               
Conread position:
               
236-633
               

               
Cow position:
               
chr13:19022055-19022474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
77, 185
               

               
Conread position:
               
236-633
               

               
Cow position:
               
chr13:34995521-34995130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
160, 56
               

               
Conread position:
               
237-585
               

               
Cow position:
               
chr13:6442315-6441952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
57, 120
               

               
Conread position:
               
237-632
               

               
Cow position:
               
chr13:48165630-48165234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
78, 7
               

               
Conread position:
               
238-622
               

               
Cow position:
               
chr13:17338218-17338619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
88, 123
               

               
Conread position:
               
238-627
               

               
Cow position:
               
chr13:16343503-16343877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
210, 61
               

               
Conread position:
               
240-412
               

               
Cow position:
               
chr13:57986137-57985964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
80, 66
               

               
Conread position:
               
240-632
               

               
Cow position:
               
chr13:26848034-26847629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
81, 7
               

               
Conread position:
               
241-420
               

               
Cow position:
               
chr13:20217602-20217418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
79, 171
               

               
Conread position:
               
242-421
               

               
Cow position:
               
chr13:33974543-33974714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
170, 64
               

               
Conread position:
               
242-473
               

               
Cow position:
               
chr13:12673491-12673260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
160, 74
               

               
Conread position:
               
242-624
               

               
Cow position:
               
chr13:59688066-59687692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
164, 76
               

               
Conread position:
               
242-630
               

               
Cow position:
               
chr13:48597706-48598097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
71, 113
               

               
Conread position:
               
242-632
               

               
Cow position:
               
chr13:972100-971703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
61, 150
               

               
Conread position:
               
242-635
               

               
Cow position:
               
chr13:47186027-47186422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
32, 224
               

               
Conread position:
               
243-627
               

               
Cow position:
               
chr13:24753691-24754074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 98
               

               
Conread position:
               
243-632
               

               
Cow position:
               
chr13:12206859-12207238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
195, 63
               

               
Conread position:
               
243-632
               

               
Cow position:
               
chr13:17821460-17821064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
158, 60
               

               
Conread position:
               
243-632
               

               
Cow position:
               
chr13:23270395-23270018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
17, 60
               

               
Conread position:
               
243-632
               

               
Cow position:
               
chr13:33281821-33282209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
167, 41
               

               
Conread position:
               
246-412
               

               
Cow position:
               
chr13:6465882-6465719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 47
               

               
Conread position:
               
246-424
               

               
Cow position:
               
chr13:38012140-38012317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
168, 75
               

               
Conread position:
               
246-478
               

               
Cow position:
               
chr13:56958778-56959010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 75
               

               
Conread position:
               
246-547
               

               
Cow position:
               
chr13:19779054-19778737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 111
               

               
Conread position:
               
246-627
               

               
Cow position:
               
chr13:20570529-20570922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
94, 157
               

               
Conread position:
               
246-629
               

               
Cow position:
               
chr13:49804789-49805167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 23
               

               
Conread position:
               
246-631
               

               
Cow position:
               
chr13:24369386-24369778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
246-632
               

               
Cow position:
               
chr13:15974419-15974805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
70, 166
               

               
Conread position:
               
246-632
               

               
Cow position:
               
chr13:26261991-26261599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 113
               

               
Conread position:
               
246-632
               

               
Cow position:
               
chr13:30025930-30026307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
139, 20
               

               
Conread position:
               
246-632
               

               
Cow position:
               
chr13:37521948-37521537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
32, 103
               

               
Conread position:
               
248-409
               

               
Cow position:
               
chr13:57446310-57446152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
248-628
               

               
Cow position:
               
chr13:15991428-15991031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
51, 100
               

               
Conread position:
               
248-632
               

               
Cow position:
               
chr13:44626168-44626575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 113
               

               
Conread position:
               
249-632
               

               
Cow position:
               
chr13:52637101-52637477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 112
               

               
Conread position:
               
251-632
               

               
Cow position:
               
chr13:34263567-34263178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 99
               

               
Conread position:
               
251-632
               

               
Cow position:
               
chr13:52228292-52227905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 104
               

               
Conread position:
               
253-629
               

               
Cow position:
               
chr13:12282644-12283030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
169, 61
               

               
Conread position:
               
254-632
               

               
Cow position:
               
chr13:24230018-24230408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
61, 98
               

               
Conread position:
               
255-631
               

               
Cow position:
               
chr13:20606311-20605925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
71, 107
               

               
Conread position:
               
255-632
               

               
Cow position:
               
chr13:34035183-34035563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
193, 98
               

               
Conread position:
               
258-632
               

               
Cow position:
               
chr13:58043438-58043824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
62, 94
               

               
Conread position:
               
266-632
               

               
Cow position:
               
chr13:23478849-23479224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
41, 222
               

               
Conread position:
               
266-645
               

               
Cow position:
               
chr13:20666565-20666178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
55, 144
               

               
Conread position:
               
269-632
               

               
Cow position:
               
chr13:3315844-3315479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
271-626
               

               
Cow position:
               
chr13:25547760-25547404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
50, 88
               

               
Conread position:
               
272-632
               

               
Cow position:
               
chr13:18491425-18491789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
43, 73
               

               
Conread position:
               
280-589
               

               
Cow position:
               
chr13:46736053-46736365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
286-632
               

               
Cow position:
               
chr13:1043121-1042761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
122, 32
               

               
Conread position:
               
287-631
               

               
Cow position:
               
chr13:11096023-11096366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
287-632
               

               
Cow position:
               
chr13:9246581-9246909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
141, 12
               

               
Conread position:
               
288-631
               

               
Cow position:
               
chr13:60973928-60974272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
11, 33
               

               
Conread position:
               
295-645
               

               
Cow position:
               
chr13:52586182-52585812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
106, 155
               

               
Conread position:
               
297-628
               

               
Cow position:
               
chr13:20562849-20563188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
23, 54
               

               
Conread position:
               
298-630
               

               
Cow position:
               
chr13:8609692-8609354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
17, 83
               

               
Conread position:
               
298-632
               

               
Cow position:
               
chr13:13465907-13465595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
248, 43
               

               
Conread position:
               
298-632
               

               
Cow position:
               
chr13:23856066-23856410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 160
               

               
Conread position:
               
298-632
               

               
Cow position:
               
chr13:60430222-60429883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
299-624
               

               
Cow position:
               
chr13:2404616-2404930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
218, 31
               

               
Conread position:
               
299-629
               

               
Cow position:
               
chr13:51822014-51821700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
299-632
               

               
Cow position:
               
chr13:23167245-23166901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
301-628
               

               
Cow position:
               
chr13:17622149-17622475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
302-631
               

               
Cow position:
               
chr13:9593369-9593701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 33
               

               
Conread position:
               
302-632
               

               
Cow position:
               
chr13:43185021-43184678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
303-627
               

               
Cow position:
               
chr13:61990460-61990144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
197, 42
               

               
Conread position:
               
304-631
               

               
Cow position:
               
chr13:15885158-15884819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 167
               

               
Conread position:
               
305-632
               

               
Cow position:
               
chr13:37484413-37484075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
307-614
               

               
Cow position:
               
chr13:15110182-15110501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
107, 34
               

               
Conread position:
               
308-631
               

               
Cow position:
               
chr13:890302-889985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
308-632
               

               
Cow position:
               
chr13:43194038-43194370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
309-632
               

               
Cow position:
               
chr13:7663551-7663234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
310-647
               

               
Cow position:
               
chr13:5082521-5082865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 133
               

               
Conread position:
               
316-628
               

               
Cow position:
               
chr13:31813752-31814058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
92, 126
               

               
Conread position:
               
316-632
               

               
Cow position:
               
chr13:13176523-13176844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
6, 144
               

               
Conread position:
               
318-633
               

               
Cow position:
               
chr13:6061129-6060811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
96, 23
               

               
Conread position:
               
319-632
               

               
Cow position:
               
chr13:12202241-12202560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
76, 253
               

               
Conread position:
               
319-632
               

               
Cow position:
               
chr13:17439889-17439571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
84, 122
               

               
Conread position:
               
319-632
               

               
Cow position:
               
chr13:17971150-17970839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
91, 48
               

               
Conread position:
               
319-632
               

               
Cow position:
               
chr13:37803770-37804074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 89
               

               
Conread position:
               
320-588
               

               
Cow position:
               
chr13:37640470-37640737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
178, 21
               

               
Conread position:
               
320-602
               

               
Cow position:
               
chr13:9265946-9265668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
119, 21
               

               
Conread position:
               
320-626
               

               
Cow position:
               
chr13:14771332-14771650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
320-631
               

               
Cow position:
               
chr13:38278267-38277943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
88, 23
               

               
Conread position:
               
320-631
               

               
Cow position:
               
chr13:54344661-54344970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
94, 29
               

               
Conread position:
               
320-632
               

               
Cow position:
               
chr13:6153903-6153584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
320-632
               

               
Cow position:
               
chr13:43762047-43762360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 136
               

               
Conread position:
               
320-632
               

               
Cow position:
               
chr13:43869232-43868923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
320-645
               

               
Cow position:
               
chr13:56148401-56148748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
320-645
               

               
Cow position:
               
chr13:56160566-56160219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
321-632
               

               
Cow position:
               
chr13:11460514-11460820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 123
               

               
Conread position:
               
321-632
               

               
Cow position:
               
chr13:50690517-50690197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
323-582
               

               
Cow position:
               
chr13:49520938-49520677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
102, 27
               

               
Conread position:
               
323-615
               

               
Cow position:
               
chr13:20231306-20231022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
91, 26
               

               
Conread position:
               
323-620
               

               
Cow position:
               
chr13:11643823-11644116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 26
               

               
Conread position:
               
323-628
               

               
Cow position:
               
chr13:21283820-21283515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
57, 18
               

               
Conread position:
               
323-628
               

               
Cow position:
               
chr13:28683246-28683550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
323-630
               

               
Cow position:
               
chr13:21155602-21155296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
143, 18
               

               
Conread position:
               
323-631
               

               
Cow position:
               
chr13:12614137-12614454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
323-631
               

               
Cow position:
               
chr13:37981860-37981558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
323-632
               

               
Cow position:
               
chr13:5713199-5713489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
134, 26
               

               
Conread position:
               
323-632
               

               
Cow position:
               
chr13:8652558-8652242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 26
               

               
Conread position:
               
323-632
               

               
Cow position:
               
chr13:12547024-12546710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
123, 26
               

               
Conread position:
               
323-632
               

               
Cow position:
               
chr13:15282051-15281741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
323-632
               

               
Cow position:
               
chr13:36771536-36771230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
323-645
               

               
Cow position:
               
chr13:11060871-11061195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
324-632
               

               
Cow position:
               
chr13:26369409-26369721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
324-632
               

               
Cow position:
               
chr13:37381686-37382005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
325-619
               

               
Cow position:
               
chr13:23651330-23651614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 8
               

               
Conread position:
               
325-624
               

               
Cow position:
               
chr13:12408403-12408096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 14
               

               
Conread position:
               
325-630
               

               
Cow position:
               
chr13:15529151-15528835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
325-631
               

               
Cow position:
               
chr13:20650101-20649789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
326-632
               

               
Cow position:
               
chr13:39952527-39952217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
327-632
               

               
Cow position:
               
chr13:25531902-25531593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 14
               

               
Conread position:
               
329-632
               

               
Cow position:
               
chr13:5658838-5658535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
333-600
               

               
Cow position:
               
chr13:45725786-45726059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
45, 6
               

               
Conread position:
               
333-632
               

               
Cow position:
               
chr13:9643993-9643687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
66, 8
               

               
Conread position:
               
336-632
               

               
Cow position:
               
chr13:8201587-8201291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
68, 87
               

               
Conread position:
               
337-632
               

               
Cow position:
               
chr13:29630754-29631053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
340-632
               

               
Cow position:
               
chr13:2413930-2414221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
340-632
               

               
Cow position:
               
chr13:18243762-18244051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
68, 104
               

               
Conread position:
               
342-635
               

               
Cow position:
               
chr13:13306001-13306301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 7
               

               
Conread position:
               
346-631
               

               
Cow position:
               
chr13:11955211-11954919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
351-590
               

               
Cow position:
               
chr13:52929622-52929862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 100
               

               
Conread position:
               
351-631
               

               
Cow position:
               
chr13:32950081-32949809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 67
               

               
Conread position:
               
351-632
               

               
Cow position:
               
chr13:45604505-45604223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
351-645
               

               
Cow position:
               
chr13:17613251-17613554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
42, 110
               

               
Conread position:
               
351-645
               

               
Cow position:
               
chr13:34941739-34941448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
54, 73
               

               
Conread position:
               
352-633
               

               
Cow position:
               
chr13:19138352-19138633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
62, 79
               

               
Conread position:
               
356-632
               

               
Cow position:
               
chr13:26383319-26383036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
58, 51
               

               
Conread position:
               
356-632
               

               
Cow position:
               
chr13:55316275-55315994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 101
               

               
Conread position:
               
356-645
               

               
Cow position:
               
chr13:61166534-61166250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
357-632
               

               
Cow position:
               
chr13:48037540-48037815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
38, 97
               

               
Conread position:
               
357-645
               

               
Cow position:
               
chr13:40651851-40652141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
48, 117
               

               
Conread position:
               
361-632
               

               
Cow position:
               
chr13:46181713-46181984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
45, 94
               

               
Conread position:
               
364-632
               

               
Cow position:
               
chr13:8839066-8838799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
42, 69
               

               
Conread position:
               
366-632
               

               
Cow position:
               
chr13:21039673-21039403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
368-635
               

               
Cow position:
               
chr13:41253549-41253816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
369-632
               

               
Cow position:
               
chr13:4463941-4464202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
174, 86
               

               
Conread position:
               
374-632
               

               
Cow position:
               
chr13:2463301-2463034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 88
               

               
Conread position:
               
376-607
               

               
Cow position:
               
chr13:4420278-4420517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
32, 86
               

               
Conread position:
               
376-632
               

               
Cow position:
               
chr13:16024525-16024784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
38, 31
               

               
Conread position:
               
379-632
               

               
Cow position:
               
chr13:17800011-17800267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
23, 103
               

               
Conread position:
               
384-632
               

               
Cow position:
               
chr13:60329702-60329945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
124, 47
               

               
Conread position:
               
385-632
               

               
Cow position:
               
chr13:33517978-33517729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
44, 70
               

               
Conread position:
               
395-654
               

               
Cow position:
               
chr13:62474842-62474583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
402-631
               

               
Cow position:
               
chr13:52879378-52879606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
141, 49
               

               
Conread position:
               
404-632
               

               
Cow position:
               
chr13:5752460-5752228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 47
               

               
Conread position:
               
411-631
               

               
Cow position:
               
chr13:9548668-9548888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 113
               

               
Conread position:
               
411-631
               

               
Cow position:
               
chr13:51108466-51108685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 37
               

               
Conread position:
               
411-632
               

               
Cow position:
               
chr13:6975820-6975595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 162
               

               
Conread position:
               
411-632
               

               
Cow position:
               
chr13:20041995-20041766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
412-632
               

               
Cow position:
               
chr13:13265782-13265997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
414-631
               

               
Cow position:
               
chr13:11147281-11147500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
414-632
               

               
Cow position:
               
chr13:563165-562943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
84, 44
               

               
Conread position:
               
427-629
               

               
Cow position:
               
chr13:22277183-22276974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
441-632
               

               
Cow position:
               
chr13:20531142-20530946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
442-631
               

               
Cow position:
               
chr13:21904669-21904856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
56, 13
               

               
Conread position:
               
443-632
               

               
Cow position:
               
chr13:37517131-37516941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
55, 11
               

               
Conread position:
               
446-636
               

               
Cow position:
               
chr13:50823543-50823354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
446-645
               

               
Cow position:
               
chr13:1779835-1780041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
448-632
               

               
Cow position:
               
chr13:60690718-60690527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
456-632
               

               
Cow position:
               
chr13:6607006-6606826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
458-632
               

               
Cow position:
               
chr13:5091647-5091466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
458-632
               

               
Cow position:
               
chr13:54093763-54093935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 98
               

               
Conread position:
               
458-645
               

               
Cow position:
               
chr13:61170702-61170507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
463-632
               

               
Cow position:
               
chr13:2339458-2339625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
80, 56
               

               
Conread position:
               
470-629
               

               
Cow position:
               
chr13:5079192-5079033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 147
               

               
Conread position:
               
470-632
               

               
Cow position:
               
chr13:21209891-21210057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
470-632
               

               
Cow position:
               
chr13:27027744-27027573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
471-632
               

               
Cow position:
               
chr13:18551476-18551643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
471-632
               

               
Cow position:
               
chr13:25261778-25261613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
471-632
               

               
Cow position:
               
chr13:60393669-60393504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
476-632
               

               
Cow position:
               
chr13:14544154-14544317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
477-625
               

               
Cow position:
               
chr13:22025671-22025521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
480-630
               

               
Cow position:
               
chr13:54237394-54237539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
485-633
               

               
Cow position:
               
chr13:24155590-24155737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
492-643
               

               
Cow position:
               
chr13:53566650-53566806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
493-629
               

               
Cow position:
               
chr13:6894149-6894286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 90
               

               
Conread position:
               
493-630
               

               
Cow position:
               
chr13:547539-547681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 110
               

               
Conread position:
               
493-630
               

               
Cow position:
               
chr13:12682489-12682348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
493-631
               

               
Cow position:
               
chr13:47356690-47356821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
493-632
               

               
Cow position:
               
chr13:15740119-15740264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
493-632
               

               
Cow position:
               
chr13:44322956-44323097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
493-632
               

               
Cow position:
               
chr13:46525390-46525247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
62, 113
               

               
Conread position:
               
493-645
               

               
Cow position:
               
chr13:1011381-1011540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
494-632
               

               
Cow position:
               
chr13:20706149-20706007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
494-632
               

               
Cow position:
               
chr13:37521323-37521185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
494-632
               

               
Cow position:
               
chr13:60436829-60436688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
495-607
               

               
Cow position:
               
chr13:7790073-7790184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
495-628
               

               
Cow position:
               
chr13:46458680-46458813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
495-631
               

               
Cow position:
               
chr13:4037937-4038074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
495-631
               

               
Cow position:
               
chr13:15172353-15172213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr13:3003499-3003642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr13:11290763-11290625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr13:14927293-14927434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr13:16155664-16155522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr13:17815826-17815966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
95, 78
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr13:25062466-25062605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
91, 69
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr13:38484889-38485026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 96
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr13:40943302-40943443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr13:55295565-55295430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 78
               

               
Conread position:
               
495-645
               

               
Cow position:
               
chr13:9884826-9884976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
495-645
               

               
Cow position:
               
chr13:37947945-37947803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
495-645
               

               
Cow position:
               
chr13:38012413-38012569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
497-632
               

               
Cow position:
               
chr13:20684061-20683927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
499-645
               

               
Cow position:
               
chr13:34052540-34052393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
502-632
               

               
Cow position:
               
chr13:27985364-27985234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
503-646
               

               
Cow position:
               
chr13:33054330-33054183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
40, 125
               

               
Conread position:
               
505-627
               

               
Cow position:
               
chr13:33352295-33352177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
505-632
               

               
Cow position:
               
chr13:24376557-24376685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
506-637
               

               
Cow position:
               
chr13:30693774-30693900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
79, 57
               

               
Conread position:
               
507-632
               

               
Cow position:
               
chr13:43839482-43839350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
507-645
               

               
Cow position:
               
chr13:43812147-43812292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
509-632
               

               
Cow position:
               
chr13:21524497-21524624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
517-632
               

               
Cow position:
               
chr13:26098225-26098340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
535-632
               

               
Cow position:
               
chr13:21989007-21988911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
544-632
               

               
Cow position:
               
chr13:14576777-14576865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
89
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.