• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8031F14.3
        

               
Conread position:
               
189-451
               

               
Cow position:
               
chr14:10937466-10937743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
196-632
               

               
Cow position:
               
chr14:24981261-24981707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
72, 32
               

               
Conread position:
               
200-630
               

               
Cow position:
               
chr14:28378167-28378615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 80
               

               
Conread position:
               
200-632
               

               
Cow position:
               
chr14:14466655-14466226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
14, 158
               

               
Conread position:
               
200-632
               

               
Cow position:
               
chr14:41809847-41809399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
29, 56
               

               
Conread position:
               
201-524
               

               
Cow position:
               
chr14:1778036-1777702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 181
               

               
Conread position:
               
202-625
               

               
Cow position:
               
chr14:27355206-27355649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
14, 157
               

               
Conread position:
               
202-632
               

               
Cow position:
               
chr14:21691442-21691027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
206, 29
               

               
Conread position:
               
206-397
               

               
Cow position:
               
chr14:29282568-29282769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 143
               

               
Conread position:
               
206-629
               

               
Cow position:
               
chr14:8541392-8540966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
22, 138
               

               
Conread position:
               
206-631
               

               
Cow position:
               
chr14:48689345-48689781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
116, 88
               

               
Conread position:
               
208-326
               

               
Cow position:
               
chr14:41755974-41756093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
209-326
               

               
Cow position:
               
chr14:27044967-27044852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 22
               

               
Conread position:
               
210-425
               

               
Cow position:
               
chr14:29723760-29723549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
9, 94
               

               
Conread position:
               
210-632
               

               
Cow position:
               
chr14:39918914-39918510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
390, 29
               

               
Conread position:
               
210-653
               

               
Cow position:
               
chr14:12667549-12668005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
26, 58
               

               
Conread position:
               
211-404
               

               
Cow position:
               
chr14:1771138-1770940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 143
               

               
Conread position:
               
211-406
               

               
Cow position:
               
chr14:15470164-15469959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 183
               

               
Conread position:
               
211-406
               

               
Cow position:
               
chr14:33229578-33229379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
212-568
               

               
Cow position:
               
chr14:4203270-4202905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
212-632
               

               
Cow position:
               
chr14:6541904-6541468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
97, 164
               

               
Conread position:
               
212-632
               

               
Cow position:
               
chr14:18345902-18345477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
212-632
               

               
Cow position:
               
chr14:26442525-26442085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 271
               

               
Conread position:
               
213-388
               

               
Cow position:
               
chr14:31342033-31342217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
115, 146
               

               
Conread position:
               
213-418
               

               
Cow position:
               
chr14:15428302-15428513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 200
               

               
Conread position:
               
213-621
               

               
Cow position:
               
chr14:47252409-47251980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
104, 205
               

               
Conread position:
               
213-632
               

               
Cow position:
               
chr14:38144286-38143860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
214-537
               

               
Cow position:
               
chr14:23424090-23424414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
101, 78
               

               
Conread position:
               
214-537
               

               
Cow position:
               
chr14:23442849-23443175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
214-556
               

               
Cow position:
               
chr14:33341575-33341934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
214-565
               

               
Cow position:
               
chr14:12512065-12511714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
214-621
               

               
Cow position:
               
chr14:49022051-49021657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
189, 18
               

               
Conread position:
               
214-632
               

               
Cow position:
               
chr14:13845818-13846239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
24, 43
               

               
Conread position:
               
214-632
               

               
Cow position:
               
chr14:35420938-35420504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
214-632
               

               
Cow position:
               
chr14:42155141-42154708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 18
               

               
Conread position:
               
215-326
               

               
Cow position:
               
chr14:19988235-19988125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
215-405
               

               
Cow position:
               
chr14:33468610-33468792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
215-421
               

               
Cow position:
               
chr14:19832565-19832353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
215-421
               

               
Cow position:
               
chr14:48829910-48829701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
98, 60
               

               
Conread position:
               
215-424
               

               
Cow position:
               
chr14:18270182-18270400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 137
               

               
Conread position:
               
215-615
               

               
Cow position:
               
chr14:13809778-13810170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 86
               

               
Conread position:
               
215-624
               

               
Cow position:
               
chr14:48447339-48446915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
111, 144
               

               
Conread position:
               
215-632
               

               
Cow position:
               
chr14:109655-109240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
215-632
               

               
Cow position:
               
chr14:5835756-5836153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
215-632
               

               
Cow position:
               
chr14:6600128-6599701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
24, 129
               

               
Conread position:
               
215-632
               

               
Cow position:
               
chr14:16237684-16237253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 64
               

               
Conread position:
               
215-632
               

               
Cow position:
               
chr14:37103031-37103463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
22, 140
               

               
Conread position:
               
215-632
               

               
Cow position:
               
chr14:41210690-41211109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
180, 78
               

               
Conread position:
               
215-645
               

               
Cow position:
               
chr14:28304962-28304520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 133
               

               
Conread position:
               
216-383
               

               
Cow position:
               
chr14:45955113-45955291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
216-412
               

               
Cow position:
               
chr14:24428876-24428679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
91, 16
               

               
Conread position:
               
216-420
               

               
Cow position:
               
chr14:35651952-35651748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
97, 21
               

               
Conread position:
               
216-434
               

               
Cow position:
               
chr14:18559228-18559005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
97, 15
               

               
Conread position:
               
216-451
               

               
Cow position:
               
chr14:12073129-12072887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
100, 141
               

               
Conread position:
               
216-562
               

               
Cow position:
               
chr14:33457219-33456858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
21, 132
               

               
Conread position:
               
216-584
               

               
Cow position:
               
chr14:16256600-16256970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 91
               

               
Conread position:
               
216-620
               

               
Cow position:
               
chr14:20110892-20110479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
216-625
               

               
Cow position:
               
chr14:23090553-23090132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
216-628
               

               
Cow position:
               
chr14:27919909-27919489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
22, 143
               

               
Conread position:
               
216-629
               

               
Cow position:
               
chr14:19618914-19618516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
216-629
               

               
Cow position:
               
chr14:23682094-23682514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
104, 193
               

               
Conread position:
               
216-632
               

               
Cow position:
               
chr14:20932449-20932871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
216-632
               

               
Cow position:
               
chr14:45677058-45677476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
75, 273
               

               
Conread position:
               
216-645
               

               
Cow position:
               
chr14:24921922-24922372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 136
               

               
Conread position:
               
217-386
               

               
Cow position:
               
chr14:12071699-12071521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
107, 142
               

               
Conread position:
               
217-397
               

               
Cow position:
               
chr14:36559399-36559212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
20, 55
               

               
Conread position:
               
217-405
               

               
Cow position:
               
chr14:11472403-11472206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 11
               

               
Conread position:
               
217-424
               

               
Cow position:
               
chr14:35421260-35421041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 135
               

               
Conread position:
               
217-451
               

               
Cow position:
               
chr14:12081299-12081062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
17, 90
               

               
Conread position:
               
217-538
               

               
Cow position:
               
chr14:15944840-15944511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 129
               

               
Conread position:
               
217-584
               

               
Cow position:
               
chr14:15997924-15997563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 83
               

               
Conread position:
               
217-627
               

               
Cow position:
               
chr14:26115886-26116311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 144
               

               
Conread position:
               
217-630
               

               
Cow position:
               
chr14:31130551-31130138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
22, 135
               

               
Conread position:
               
217-631
               

               
Cow position:
               
chr14:12244555-12244130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 128
               

               
Conread position:
               
217-632
               

               
Cow position:
               
chr14:13006352-13006759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
189, 110
               

               
Conread position:
               
217-632
               

               
Cow position:
               
chr14:20010484-20010058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
109, 14
               

               
Conread position:
               
217-632
               

               
Cow position:
               
chr14:20640800-20640371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
103, 15
               

               
Conread position:
               
217-632
               

               
Cow position:
               
chr14:33774197-33773798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
217-632
               

               
Cow position:
               
chr14:40230809-40230384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
217-632
               

               
Cow position:
               
chr14:48492975-48492531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
14, 147
               

               
Conread position:
               
217-645
               

               
Cow position:
               
chr14:38168532-38168949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 82
               

               
Conread position:
               
217-646
               

               
Cow position:
               
chr14:17554665-17554215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
20, 138
               

               
Conread position:
               
218-324
               

               
Cow position:
               
chr14:29011218-29011111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
218-326
               

               
Cow position:
               
chr14:30050118-30050011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
218-377
               

               
Cow position:
               
chr14:15796094-15795926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
218-385
               

               
Cow position:
               
chr14:40107284-40107113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 121
               

               
Conread position:
               
218-389
               

               
Cow position:
               
chr14:21593174-21592997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
218-405
               

               
Cow position:
               
chr14:11079283-11079474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
218-414
               

               
Cow position:
               
chr14:20245340-20245136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 129
               

               
Conread position:
               
218-416
               

               
Cow position:
               
chr14:4481504-4481703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
218-418
               

               
Cow position:
               
chr14:36425576-36425370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
13, 127
               

               
Conread position:
               
218-420
               

               
Cow position:
               
chr14:23005504-23005708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 189
               

               
Conread position:
               
218-420
               

               
Cow position:
               
chr14:27364406-27364614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 128
               

               
Conread position:
               
218-436
               

               
Cow position:
               
chr14:23419624-23419855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
218-451
               

               
Cow position:
               
chr14:7198327-7198570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
110, 13
               

               
Conread position:
               
218-488
               

               
Cow position:
               
chr14:23104167-23103890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 136
               

               
Conread position:
               
218-530
               

               
Cow position:
               
chr14:11470323-11469998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
18, 133
               

               
Conread position:
               
218-577
               

               
Cow position:
               
chr14:4877399-4877034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
20, 234
               

               
Conread position:
               
218-616
               

               
Cow position:
               
chr14:14949384-14948973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
96, 19
               

               
Conread position:
               
218-632
               

               
Cow position:
               
chr14:10609510-10609942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
218-632
               

               
Cow position:
               
chr14:12036997-12036589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
280, 10
               

               
Conread position:
               
218-632
               

               
Cow position:
               
chr14:36555298-36554899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
116, 12
               

               
Conread position:
               
218-632
               

               
Cow position:
               
chr14:39770390-39769977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
51, 14
               

               
Conread position:
               
219-389
               

               
Cow position:
               
chr14:8949483-8949656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
219-631
               

               
Cow position:
               
chr14:14327293-14326852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
219-632
               

               
Cow position:
               
chr14:18941458-18941051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 158
               

               
Conread position:
               
219-632
               

               
Cow position:
               
chr14:28987519-28987945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 193
               

               
Conread position:
               
219-645
               

               
Cow position:
               
chr14:20016883-20016441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
14, 143
               

               
Conread position:
               
220-542
               

               
Cow position:
               
chr14:26655305-26654969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
99, 8
               

               
Conread position:
               
220-595
               

               
Cow position:
               
chr14:38747512-38747878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
85, 11
               

               
Conread position:
               
220-597
               

               
Cow position:
               
chr14:25986343-25986738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
99, 141
               

               
Conread position:
               
220-605
               

               
Cow position:
               
chr14:25979101-25979493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
98, 139
               

               
Conread position:
               
220-632
               

               
Cow position:
               
chr14:10858272-10858684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 12
               

               
Conread position:
               
220-632
               

               
Cow position:
               
chr14:20667174-20666768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
101, 163
               

               
Conread position:
               
221-389
               

               
Cow position:
               
chr14:25912485-25912657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 94
               

               
Conread position:
               
221-624
               

               
Cow position:
               
chr14:50362625-50363050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 9
               

               
Conread position:
               
222-405
               

               
Cow position:
               
chr14:23465220-23465027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
223-420
               

               
Cow position:
               
chr14:7127694-7127895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
90, 118
               

               
Conread position:
               
224-632
               

               
Cow position:
               
chr14:5222451-5222034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
12, 97
               

               
Conread position:
               
225-458
               

               
Cow position:
               
chr14:20466771-20467009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 124
               

               
Conread position:
               
226-632
               

               
Cow position:
               
chr14:8786703-8786296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 75
               

               
Conread position:
               
227-597
               

               
Cow position:
               
chr14:2975248-2974878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 124
               

               
Conread position:
               
227-632
               

               
Cow position:
               
chr14:36437652-36437233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
9, 127
               

               
Conread position:
               
227-632
               

               
Cow position:
               
chr14:38355046-38355435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
212, 60
               

               
Conread position:
               
227-632
               

               
Cow position:
               
chr14:45052276-45052691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
90, 134
               

               
Conread position:
               
228-405
               

               
Cow position:
               
chr14:23078953-23078770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
93, 119
               

               
Conread position:
               
228-420
               

               
Cow position:
               
chr14:145672-145474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
228-421
               

               
Cow position:
               
chr14:8083034-8083237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 122
               

               
Conread position:
               
228-425
               

               
Cow position:
               
chr14:30023362-30023158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
9, 134
               

               
Conread position:
               
228-539
               

               
Cow position:
               
chr14:49817847-49817542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 128
               

               
Conread position:
               
228-590
               

               
Cow position:
               
chr14:7799756-7800125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
228-618
               

               
Cow position:
               
chr14:24236661-24237064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 239
               

               
Conread position:
               
228-631
               

               
Cow position:
               
chr14:35381426-35381840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 125
               

               
Conread position:
               
228-632
               

               
Cow position:
               
chr14:6490865-6490451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 136
               

               
Conread position:
               
228-632
               

               
Cow position:
               
chr14:11043656-11043237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
7, 134
               

               
Conread position:
               
228-632
               

               
Cow position:
               
chr14:11508400-11507990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
8, 132
               

               
Conread position:
               
228-632
               

               
Cow position:
               
chr14:12961436-12961821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
8, 88
               

               
Conread position:
               
228-632
               

               
Cow position:
               
chr14:13385204-13385626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 122
               

               
Conread position:
               
228-632
               

               
Cow position:
               
chr14:20712844-20712429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
8, 124
               

               
Conread position:
               
228-632
               

               
Cow position:
               
chr14:41749917-41749510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
85, 179
               

               
Conread position:
               
231-632
               

               
Cow position:
               
chr14:21357399-21357805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 171
               

               
Conread position:
               
232-410
               

               
Cow position:
               
chr14:41267880-41267705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
232-420
               

               
Cow position:
               
chr14:50519334-50519142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
232-454
               

               
Cow position:
               
chr14:49940856-49941083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 122
               

               
Conread position:
               
232-495
               

               
Cow position:
               
chr14:36443174-36442904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
73, 114
               

               
Conread position:
               
232-531
               

               
Cow position:
               
chr14:37422930-37422637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
181, 74
               

               
Conread position:
               
232-540
               

               
Cow position:
               
chr14:35503206-35503524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 112
               

               
Conread position:
               
232-562
               

               
Cow position:
               
chr14:44084633-44084297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
171, 60
               

               
Conread position:
               
232-580
               

               
Cow position:
               
chr14:36289949-36289600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 98
               

               
Conread position:
               
232-600
               

               
Cow position:
               
chr14:48741023-48740657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
103, 27
               

               
Conread position:
               
232-612
               

               
Cow position:
               
chr14:19852093-19851695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
75, 128
               

               
Conread position:
               
232-618
               

               
Cow position:
               
chr14:1803276-1802873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
96, 45
               

               
Conread position:
               
232-624
               

               
Cow position:
               
chr14:38529822-38530210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
81, 54
               

               
Conread position:
               
232-626
               

               
Cow position:
               
chr14:9019884-9020274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
182, 60
               

               
Conread position:
               
232-627
               

               
Cow position:
               
chr14:26620465-26620867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
105, 185
               

               
Conread position:
               
232-629
               

               
Cow position:
               
chr14:21017978-21018362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
219, 9
               

               
Conread position:
               
232-631
               

               
Cow position:
               
chr14:42330189-42330606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
71, 266
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr14:6736025-6735613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
28, 51
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr14:14622325-14621932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
193, 74
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr14:14979865-14979450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
31, 122
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr14:21284496-21284883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
266, 61
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr14:33791036-33791442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
89, 120
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr14:38920800-38921191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
36, 98
               

               
Conread position:
               
232-633
               

               
Cow position:
               
chr14:37679141-37678744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
176, 60
               

               
Conread position:
               
232-645
               

               
Cow position:
               
chr14:22988878-22989300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 180
               

               
Conread position:
               
232-645
               

               
Cow position:
               
chr14:32452094-32452522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 121
               

               
Conread position:
               
232-646
               

               
Cow position:
               
chr14:15518560-15518107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
87, 127
               

               
Conread position:
               
233-452
               

               
Cow position:
               
chr14:45312640-45312865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 59
               

               
Conread position:
               
233-545
               

               
Cow position:
               
chr14:40754400-40754079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 111
               

               
Conread position:
               
233-632
               

               
Cow position:
               
chr14:28115347-28114930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 111
               

               
Conread position:
               
234-326
               

               
Cow position:
               
chr14:7386708-7386616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
234-455
               

               
Cow position:
               
chr14:12884109-12884331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
85, 110
               

               
Conread position:
               
235-645
               

               
Cow position:
               
chr14:22381705-22381289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
236-532
               

               
Cow position:
               
chr14:12954528-12954231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
167, 83
               

               
Conread position:
               
236-622
               

               
Cow position:
               
chr14:16352205-16352565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
307, 78
               

               
Conread position:
               
236-629
               

               
Cow position:
               
chr14:39037086-39037479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
178, 62
               

               
Conread position:
               
236-632
               

               
Cow position:
               
chr14:18309453-18309057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 104
               

               
Conread position:
               
236-632
               

               
Cow position:
               
chr14:34200012-34199589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
54, 193
               

               
Conread position:
               
236-632
               

               
Cow position:
               
chr14:47673032-47672630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
11, 110
               

               
Conread position:
               
237-631
               

               
Cow position:
               
chr14:48426920-48427328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 213
               

               
Conread position:
               
238-538
               

               
Cow position:
               
chr14:30756690-30757000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 122
               

               
Conread position:
               
240-537
               

               
Cow position:
               
chr14:46997903-46998202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
168, 53
               

               
Conread position:
               
242-502
               

               
Cow position:
               
chr14:1796050-1796312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 29
               

               
Conread position:
               
242-617
               

               
Cow position:
               
chr14:25001885-25002274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 217
               

               
Conread position:
               
242-624
               

               
Cow position:
               
chr14:14182204-14182587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 100
               

               
Conread position:
               
242-628
               

               
Cow position:
               
chr14:24387303-24387700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 22
               

               
Conread position:
               
242-632
               

               
Cow position:
               
chr14:5630021-5630414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 213
               

               
Conread position:
               
242-632
               

               
Cow position:
               
chr14:19594282-19593887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
79, 104
               

               
Conread position:
               
242-632
               

               
Cow position:
               
chr14:50589537-50589137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
131, 22
               

               
Conread position:
               
243-632
               

               
Cow position:
               
chr14:33247566-33247185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 63
               

               
Conread position:
               
243-632
               

               
Cow position:
               
chr14:48496293-48495893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
52, 118
               

               
Conread position:
               
244-632
               

               
Cow position:
               
chr14:34083294-34082902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
158, 51
               

               
Conread position:
               
245-632
               

               
Cow position:
               
chr14:8101653-8102031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
50, 99
               

               
Conread position:
               
246-624
               

               
Cow position:
               
chr14:26941364-26940978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
72, 111
               

               
Conread position:
               
246-624
               

               
Cow position:
               
chr14:49670917-49671309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 107
               

               
Conread position:
               
246-630
               

               
Cow position:
               
chr14:7959655-7960016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
176, 53
               

               
Conread position:
               
246-632
               

               
Cow position:
               
chr14:26433392-26432988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
47, 238
               

               
Conread position:
               
246-632
               

               
Cow position:
               
chr14:27848036-27848453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
246-632
               

               
Cow position:
               
chr14:40165286-40165674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
247-507
               

               
Cow position:
               
chr14:12127539-12127285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
192, 59
               

               
Conread position:
               
247-617
               

               
Cow position:
               
chr14:12520446-12520071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
56, 111
               

               
Conread position:
               
247-632
               

               
Cow position:
               
chr14:23712553-23712939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
174, 69
               

               
Conread position:
               
248-631
               

               
Cow position:
               
chr14:1646325-1645937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
248-632
               

               
Cow position:
               
chr14:39434395-39434009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
61, 92
               

               
Conread position:
               
248-633
               

               
Cow position:
               
chr14:17755435-17755812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
249-632
               

               
Cow position:
               
chr14:18904728-18904355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 46
               

               
Conread position:
               
250-632
               

               
Cow position:
               
chr14:44742511-44742128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
127, 76
               

               
Conread position:
               
251-632
               

               
Cow position:
               
chr14:14187207-14187586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
156, 10
               

               
Conread position:
               
253-632
               

               
Cow position:
               
chr14:7695127-7695503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
73, 215
               

               
Conread position:
               
261-412
               

               
Cow position:
               
chr14:12617622-12617471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 90
               

               
Conread position:
               
262-630
               

               
Cow position:
               
chr14:41127779-41128144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
65, 83
               

               
Conread position:
               
266-627
               

               
Cow position:
               
chr14:27305026-27305404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
79, 185
               

               
Conread position:
               
268-632
               

               
Cow position:
               
chr14:106683-106322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
271-632
               

               
Cow position:
               
chr14:19188932-19189292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
181, 151
               

               
Conread position:
               
271-632
               

               
Cow position:
               
chr14:41479781-41479406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 38
               

               
Conread position:
               
293-632
               

               
Cow position:
               
chr14:37884498-37884158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
129, 20
               

               
Conread position:
               
295-631
               

               
Cow position:
               
chr14:30661913-30662239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
202, 38
               

               
Conread position:
               
297-613
               

               
Cow position:
               
chr14:26490835-26490510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
298-632
               

               
Cow position:
               
chr14:37131568-37131911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 39
               

               
Conread position:
               
298-632
               

               
Cow position:
               
chr14:38338217-38337891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
116, 37
               

               
Conread position:
               
298-633
               

               
Cow position:
               
chr14:37884000-37883665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
109, 45
               

               
Conread position:
               
299-624
               

               
Cow position:
               
chr14:8749992-8750319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
299-631
               

               
Cow position:
               
chr14:26097780-26097435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
299-632
               

               
Cow position:
               
chr14:22583066-22583392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
299-632
               

               
Cow position:
               
chr14:25779018-25779347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
35, 43
               

               
Conread position:
               
299-632
               

               
Cow position:
               
chr14:36709043-36709376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
109, 31
               

               
Conread position:
               
299-632
               

               
Cow position:
               
chr14:45605015-45605343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
151, 44
               

               
Conread position:
               
300-645
               

               
Cow position:
               
chr14:34355791-34355436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
301-632
               

               
Cow position:
               
chr14:37155797-37156121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
105, 19
               

               
Conread position:
               
305-632
               

               
Cow position:
               
chr14:17841368-17841034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
101, 36
               

               
Conread position:
               
305-632
               

               
Cow position:
               
chr14:33309580-33309256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
317-632
               

               
Cow position:
               
chr14:39778687-39779006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
91, 30
               

               
Conread position:
               
318-632
               

               
Cow position:
               
chr14:25403999-25403691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
96, 23
               

               
Conread position:
               
319-632
               

               
Cow position:
               
chr14:9308166-9308478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
103, 88
               

               
Conread position:
               
319-632
               

               
Cow position:
               
chr14:15055055-15054733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
83, 133
               

               
Conread position:
               
319-632
               

               
Cow position:
               
chr14:16834258-16834583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
84, 131
               

               
Conread position:
               
319-632
               

               
Cow position:
               
chr14:34983803-34984117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
56, 107
               

               
Conread position:
               
319-632
               

               
Cow position:
               
chr14:35018817-35018503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 26
               

               
Conread position:
               
319-647
               

               
Cow position:
               
chr14:20385049-20384716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
320-594
               

               
Cow position:
               
chr14:33830239-33830511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
178, 74
               

               
Conread position:
               
320-632
               

               
Cow position:
               
chr14:9901121-9901423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
320-632
               

               
Cow position:
               
chr14:19372276-19372596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
320-632
               

               
Cow position:
               
chr14:19863497-19863187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
14, 137
               

               
Conread position:
               
320-632
               

               
Cow position:
               
chr14:20600322-20600634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
39, 129
               

               
Conread position:
               
320-632
               

               
Cow position:
               
chr14:48412945-48412624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
321-630
               

               
Cow position:
               
chr14:29632943-29632632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
321-631
               

               
Cow position:
               
chr14:27592018-27591703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 50
               

               
Conread position:
               
322-633
               

               
Cow position:
               
chr14:39926148-39926445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
323-595
               

               
Cow position:
               
chr14:19394304-19394575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
91, 26
               

               
Conread position:
               
323-608
               

               
Cow position:
               
chr14:44257864-44258156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
323-629
               

               
Cow position:
               
chr14:39618435-39618126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
84, 26
               

               
Conread position:
               
323-632
               

               
Cow position:
               
chr14:4109549-4109221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
23, 29
               

               
Conread position:
               
323-632
               

               
Cow position:
               
chr14:19129447-19129764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 26
               

               
Conread position:
               
323-632
               

               
Cow position:
               
chr14:21964078-21964373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
177, 20
               

               
Conread position:
               
323-632
               

               
Cow position:
               
chr14:40033936-40034223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
323-632
               

               
Cow position:
               
chr14:49086248-49086558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
324-631
               

               
Cow position:
               
chr14:10697560-10697274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 27
               

               
Conread position:
               
325-645
               

               
Cow position:
               
chr14:18657664-18657333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
325-670
               

               
Cow position:
               
chr14:28003911-28004276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
329-627
               

               
Cow position:
               
chr14:44793858-44794156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 29
               

               
Conread position:
               
330-645
               

               
Cow position:
               
chr14:42784911-42785205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
333-632
               

               
Cow position:
               
chr14:9837943-9837639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 89
               

               
Conread position:
               
337-631
               

               
Cow position:
               
chr14:24796479-24796172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
341-632
               

               
Cow position:
               
chr14:18449050-18448756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 26
               

               
Conread position:
               
346-629
               

               
Cow position:
               
chr14:3564247-3564525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
346-632
               

               
Cow position:
               
chr14:15913576-15913298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
152, 61
               

               
Conread position:
               
350-632
               

               
Cow position:
               
chr14:43249555-43249838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 57
               

               
Conread position:
               
351-629
               

               
Cow position:
               
chr14:20468127-20467854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
147, 71
               

               
Conread position:
               
351-632
               

               
Cow position:
               
chr14:22966723-22967005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
352-631
               

               
Cow position:
               
chr14:29029798-29030080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
352-632
               

               
Cow position:
               
chr14:38378985-38379274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
54, 77
               

               
Conread position:
               
356-629
               

               
Cow position:
               
chr14:11615248-11614971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 51
               

               
Conread position:
               
357-632
               

               
Cow position:
               
chr14:28795646-28795929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 50
               

               
Conread position:
               
358-632
               

               
Cow position:
               
chr14:31784939-31785229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
50, 75
               

               
Conread position:
               
359-632
               

               
Cow position:
               
chr14:17238328-17238615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
49, 115
               

               
Conread position:
               
359-632
               

               
Cow position:
               
chr14:34221035-34221307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
362-631
               

               
Cow position:
               
chr14:25231672-25231397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
5, 91
               

               
Conread position:
               
367-629
               

               
Cow position:
               
chr14:25362328-25362597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
373-632
               

               
Cow position:
               
chr14:15032746-15033008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
21, 14
               

               
Conread position:
               
374-626
               

               
Cow position:
               
chr14:33643785-33643544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
35, 39
               

               
Conread position:
               
376-618
               

               
Cow position:
               
chr14:12324412-12324663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
378-630
               

               
Cow position:
               
chr14:7558445-7558180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 7
               

               
Conread position:
               
379-627
               

               
Cow position:
               
chr14:27362036-27362292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 81
               

               
Conread position:
               
379-632
               

               
Cow position:
               
chr14:33326399-33326141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
382-632
               

               
Cow position:
               
chr14:6175586-6175836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
393-632
               

               
Cow position:
               
chr14:38296272-38296023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 80
               

               
Conread position:
               
394-629
               

               
Cow position:
               
chr14:35047586-35047824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
394-632
               

               
Cow position:
               
chr14:8754334-8754579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
48, 179
               

               
Conread position:
               
406-644
               

               
Cow position:
               
chr14:35266986-35266746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
128, 40
               

               
Conread position:
               
410-632
               

               
Cow position:
               
chr14:11748879-11748668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
133, 43
               

               
Conread position:
               
410-632
               

               
Cow position:
               
chr14:11981668-11981906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
411-612
               

               
Cow position:
               
chr14:37435271-37435063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
411-632
               

               
Cow position:
               
chr14:24991854-24992065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 47
               

               
Conread position:
               
411-632
               

               
Cow position:
               
chr14:27312455-27312677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
60, 40
               

               
Conread position:
               
412-632
               

               
Cow position:
               
chr14:19221911-19222134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
86, 211
               

               
Conread position:
               
414-645
               

               
Cow position:
               
chr14:23464781-23464549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
91, 41
               

               
Conread position:
               
431-631
               

               
Cow position:
               
chr14:46490215-46490003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
431-632
               

               
Cow position:
               
chr14:3878505-3878705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
112, 54
               

               
Conread position:
               
432-631
               

               
Cow position:
               
chr14:41756309-41756511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
66, 157
               

               
Conread position:
               
442-632
               

               
Cow position:
               
chr14:26448810-26449001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
442-632
               

               
Cow position:
               
chr14:34163812-34163622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
443-631
               

               
Cow position:
               
chr14:24797513-24797325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
445-645
               

               
Cow position:
               
chr14:33209286-33209093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 6
               

               
Conread position:
               
455-619
               

               
Cow position:
               
chr14:22952921-22952758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 117
               

               
Conread position:
               
455-632
               

               
Cow position:
               
chr14:7270936-7270763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 65
               

               
Conread position:
               
455-632
               

               
Cow position:
               
chr14:8964621-8964796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
131, 54
               

               
Conread position:
               
458-632
               

               
Cow position:
               
chr14:19624161-19624343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
463-632
               

               
Cow position:
               
chr14:10912884-10912720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
463-632
               

               
Cow position:
               
chr14:12614013-12613849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 127
               

               
Conread position:
               
463-632
               

               
Cow position:
               
chr14:33538842-33538673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
29, 111
               

               
Conread position:
               
467-626
               

               
Cow position:
               
chr14:42918174-42918337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
470-628
               

               
Cow position:
               
chr14:12484212-12484054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
28, 78
               

               
Conread position:
               
470-633
               

               
Cow position:
               
chr14:44383116-44382945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
471-632
               

               
Cow position:
               
chr14:46735393-46735565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
471-645
               

               
Cow position:
               
chr14:41190787-41190614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 114
               

               
Conread position:
               
475-632
               

               
Cow position:
               
chr14:24581018-24581177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
476-632
               

               
Cow position:
               
chr14:5502068-5501899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
476-632
               

               
Cow position:
               
chr14:7316921-7317089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
476-632
               

               
Cow position:
               
chr14:46965653-46965812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
477-632
               

               
Cow position:
               
chr14:12856696-12856849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
477-635
               

               
Cow position:
               
chr14:8784279-8784435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
479-632
               

               
Cow position:
               
chr14:16310809-16310652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
481-632
               

               
Cow position:
               
chr14:11641471-11641322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 84
               

               
Conread position:
               
481-632
               

               
Cow position:
               
chr14:24893855-24894013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
481-632
               

               
Cow position:
               
chr14:35651106-35650953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 51
               

               
Conread position:
               
493-632
               

               
Cow position:
               
chr14:24786054-24786186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
493-645
               

               
Cow position:
               
chr14:34020799-34020956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
494-632
               

               
Cow position:
               
chr14:30926816-30926957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 107
               

               
Conread position:
               
494-633
               

               
Cow position:
               
chr14:43193172-43193313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 45
               

               
Conread position:
               
495-630
               

               
Cow position:
               
chr14:27791642-27791781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr14:6234154-6234010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr14:8495267-8495407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr14:11820008-11819871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr14:12250082-12249943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr14:19633294-19633435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr14:19996431-19996571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr14:25695495-25695633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
48, 97
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr14:26470742-26470882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr14:28090861-28090719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr14:37640350-37640485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr14:39518809-39518949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr14:40433035-40433174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 74
               

               
Conread position:
               
495-633
               

               
Cow position:
               
chr14:33462274-33462413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
89, 47
               

               
Conread position:
               
495-633
               

               
Cow position:
               
chr14:44237591-44237446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
495-635
               

               
Cow position:
               
chr14:24840061-24839919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
497-632
               

               
Cow position:
               
chr14:27866021-27865879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
498-632
               

               
Cow position:
               
chr14:45068973-45068834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
500-632
               

               
Cow position:
               
chr14:34096471-34096342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
501-611
               

               
Cow position:
               
chr14:28924506-28924617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
502-632
               

               
Cow position:
               
chr14:21534913-21534787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
503-632
               

               
Cow position:
               
chr14:17397481-17397352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
507-629
               

               
Cow position:
               
chr14:26960312-26960189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
510-645
               

               
Cow position:
               
chr14:29300236-29300099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
535-632
               

               
Cow position:
               
chr14:19513220-19513124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               
Show alignments to all cow chromosomes.