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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8031F14.3
        

               
Conread position:
               
191-449
               

               
Cow position:
               
chr4:58018572-58018309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
118, 36
               

               
Conread position:
               
196-633
               

               
Cow position:
               
chr4:49813442-49813885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
35, 97
               

               
Conread position:
               
197-617
               

               
Cow position:
               
chr4:29107139-29106697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
8, 274
               

               
Conread position:
               
197-632
               

               
Cow position:
               
chr4:1015302-1014850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 165
               

               
Conread position:
               
198-399
               

               
Cow position:
               
chr4:44681035-44681233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
198-629
               

               
Cow position:
               
chr4:20327501-20327929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
183, 30
               

               
Conread position:
               
198-631
               

               
Cow position:
               
chr4:31136981-31136539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
40, 390
               

               
Conread position:
               
199-632
               

               
Cow position:
               
chr4:36944989-36945409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
235, 29
               

               
Conread position:
               
206-325
               

               
Cow position:
               
chr4:53050211-53050093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
206-594
               

               
Cow position:
               
chr4:45076858-45077252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
14, 140
               

               
Conread position:
               
206-629
               

               
Cow position:
               
chr4:65919831-65919403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
114, 22
               

               
Conread position:
               
206-632
               

               
Cow position:
               
chr4:66547543-66547970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
15, 149
               

               
Conread position:
               
207-420
               

               
Cow position:
               
chr4:46560398-46560178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 159
               

               
Conread position:
               
207-627
               

               
Cow position:
               
chr4:10472432-10472011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 79
               

               
Conread position:
               
208-631
               

               
Cow position:
               
chr4:4084245-4084662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 17
               

               
Conread position:
               
208-632
               

               
Cow position:
               
chr4:23846838-23847268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
26, 137
               

               
Conread position:
               
208-645
               

               
Cow position:
               
chr4:54938094-54937656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 22
               

               
Conread position:
               
209-628
               

               
Cow position:
               
chr4:37343338-37342904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
13, 146
               

               
Conread position:
               
209-633
               

               
Cow position:
               
chr4:25227146-25226715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
176, 23
               

               
Conread position:
               
210-326
               

               
Cow position:
               
chr4:11186177-11186064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
210-397
               

               
Cow position:
               
chr4:46234949-46235139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
117, 143
               

               
Conread position:
               
210-455
               

               
Cow position:
               
chr4:26332987-26333235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
111, 142
               

               
Conread position:
               
210-455
               

               
Cow position:
               
chr4:26335154-26335402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
104, 142
               

               
Conread position:
               
210-630
               

               
Cow position:
               
chr4:19314202-19313789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 56
               

               
Conread position:
               
210-632
               

               
Cow position:
               
chr4:11897091-11897516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
162, 18
               

               
Conread position:
               
210-632
               

               
Cow position:
               
chr4:59055661-59056057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
198, 29
               

               
Conread position:
               
210-650
               

               
Cow position:
               
chr4:68076326-68076764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
78, 145
               

               
Conread position:
               
211-326
               

               
Cow position:
               
chr4:27691452-27691573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
211-407
               

               
Cow position:
               
chr4:45840609-45840409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 112
               

               
Conread position:
               
211-414
               

               
Cow position:
               
chr4:2713643-2713856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 149
               

               
Conread position:
               
211-421
               

               
Cow position:
               
chr4:16091106-16091319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
129, 19
               

               
Conread position:
               
211-632
               

               
Cow position:
               
chr4:13326743-13327175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
119, 27
               

               
Conread position:
               
211-632
               

               
Cow position:
               
chr4:32259626-32260064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
211-645
               

               
Cow position:
               
chr4:19265794-19265342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
11, 156
               

               
Conread position:
               
212-318
               

               
Cow position:
               
chr4:5904719-5904615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
212-626
               

               
Cow position:
               
chr4:23526908-23526486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
212-632
               

               
Cow position:
               
chr4:656596-657035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
25, 123
               

               
Conread position:
               
212-632
               

               
Cow position:
               
chr4:25197278-25197715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 149
               

               
Conread position:
               
212-632
               

               
Cow position:
               
chr4:37935094-37935498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
192, 19
               

               
Conread position:
               
212-645
               

               
Cow position:
               
chr4:7430520-7430088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
212-645
               

               
Cow position:
               
chr4:59785528-59785087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 14
               

               
Conread position:
               
213-396
               

               
Cow position:
               
chr4:65291652-65291834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 105
               

               
Conread position:
               
213-416
               

               
Cow position:
               
chr4:38949318-38949537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 148
               

               
Conread position:
               
213-420
               

               
Cow position:
               
chr4:8083596-8083801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 87
               

               
Conread position:
               
213-420
               

               
Cow position:
               
chr4:60527391-60527178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 66
               

               
Conread position:
               
213-579
               

               
Cow position:
               
chr4:20124757-20125154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 140
               

               
Conread position:
               
213-613
               

               
Cow position:
               
chr4:21391606-21392011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
213-632
               

               
Cow position:
               
chr4:16762510-16762949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
213-632
               

               
Cow position:
               
chr4:47731071-47730645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
213-632
               

               
Cow position:
               
chr4:66256890-66256470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
24, 51
               

               
Conread position:
               
213-643
               

               
Cow position:
               
chr4:27530322-27529885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
108, 51
               

               
Conread position:
               
214-600
               

               
Cow position:
               
chr4:22073111-22073505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
214-630
               

               
Cow position:
               
chr4:29291711-29291307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 12
               

               
Conread position:
               
214-632
               

               
Cow position:
               
chr4:508701-509115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
214-645
               

               
Cow position:
               
chr4:3688134-3687698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
215-444
               

               
Cow position:
               
chr4:56746202-56745961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 146
               

               
Conread position:
               
215-560
               

               
Cow position:
               
chr4:18756646-18756288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
215-562
               

               
Cow position:
               
chr4:20026896-20027248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
215-575
               

               
Cow position:
               
chr4:36290829-36290468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
215-617
               

               
Cow position:
               
chr4:61388859-61389276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
215-630
               

               
Cow position:
               
chr4:41867655-41867229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
215-632
               

               
Cow position:
               
chr4:10999504-10999921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 16
               

               
Conread position:
               
215-632
               

               
Cow position:
               
chr4:42673388-42672954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
16, 148
               

               
Conread position:
               
215-632
               

               
Cow position:
               
chr4:43148624-43148186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 137
               

               
Conread position:
               
215-632
               

               
Cow position:
               
chr4:46061157-46060729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 147
               

               
Conread position:
               
216-325
               

               
Cow position:
               
chr4:47035513-47035623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
216-397
               

               
Cow position:
               
chr4:40393018-40392836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
82, 93
               

               
Conread position:
               
216-403
               

               
Cow position:
               
chr4:40995942-40995746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 135
               

               
Conread position:
               
216-403
               

               
Cow position:
               
chr4:56236345-56236537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
216-405
               

               
Cow position:
               
chr4:5250395-5250200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
103, 15
               

               
Conread position:
               
216-405
               

               
Cow position:
               
chr4:19543150-19542949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
103, 146
               

               
Conread position:
               
216-405
               

               
Cow position:
               
chr4:61998991-61999189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
105, 139
               

               
Conread position:
               
216-417
               

               
Cow position:
               
chr4:36876652-36876859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
67, 15
               

               
Conread position:
               
216-421
               

               
Cow position:
               
chr4:23984911-23985127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 202
               

               
Conread position:
               
216-422
               

               
Cow position:
               
chr4:8352357-8352572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
103, 16
               

               
Conread position:
               
216-432
               

               
Cow position:
               
chr4:4647614-4647386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
216-432
               

               
Cow position:
               
chr4:30944160-30943939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
104, 16
               

               
Conread position:
               
216-510
               

               
Cow position:
               
chr4:32693997-32693689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
25, 132
               

               
Conread position:
               
216-541
               

               
Cow position:
               
chr4:11611071-11610752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
71, 103
               

               
Conread position:
               
216-541
               

               
Cow position:
               
chr4:13026500-13026174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 21
               

               
Conread position:
               
216-574
               

               
Cow position:
               
chr4:47262746-47262373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 135
               

               
Conread position:
               
216-588
               

               
Cow position:
               
chr4:52823195-52823577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
105, 130
               

               
Conread position:
               
216-626
               

               
Cow position:
               
chr4:68764729-68764304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
12, 138
               

               
Conread position:
               
216-627
               

               
Cow position:
               
chr4:65825618-65826067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
92, 15
               

               
Conread position:
               
216-628
               

               
Cow position:
               
chr4:3820629-3820209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
87, 35
               

               
Conread position:
               
216-628
               

               
Cow position:
               
chr4:19584920-19584491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
53, 16
               

               
Conread position:
               
216-629
               

               
Cow position:
               
chr4:10968193-10968599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 15
               

               
Conread position:
               
216-631
               

               
Cow position:
               
chr4:21259412-21259000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
113, 71
               

               
Conread position:
               
216-632
               

               
Cow position:
               
chr4:9137496-9137057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 151
               

               
Conread position:
               
216-632
               

               
Cow position:
               
chr4:9795166-9795588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
15, 154
               

               
Conread position:
               
216-632
               

               
Cow position:
               
chr4:13043481-13043053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
15, 152
               

               
Conread position:
               
216-632
               

               
Cow position:
               
chr4:19315795-19316217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 190
               

               
Conread position:
               
216-632
               

               
Cow position:
               
chr4:35982204-35981772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
216-632
               

               
Cow position:
               
chr4:51903818-51903385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
216-632
               

               
Cow position:
               
chr4:53126308-53125920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
118, 27
               

               
Conread position:
               
216-632
               

               
Cow position:
               
chr4:54455139-54455561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
55, 202
               

               
Conread position:
               
216-632
               

               
Cow position:
               
chr4:59871686-59871276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 16
               

               
Conread position:
               
216-633
               

               
Cow position:
               
chr4:58248613-58248189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 135
               

               
Conread position:
               
217-405
               

               
Cow position:
               
chr4:50718997-50718802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
78, 141
               

               
Conread position:
               
217-406
               

               
Cow position:
               
chr4:36709230-36709032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
102, 20
               

               
Conread position:
               
217-420
               

               
Cow position:
               
chr4:35291229-35291020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 11
               

               
Conread position:
               
217-449
               

               
Cow position:
               
chr4:5790851-5790617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
107, 11
               

               
Conread position:
               
217-562
               

               
Cow position:
               
chr4:48409082-48409413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
190, 15
               

               
Conread position:
               
217-589
               

               
Cow position:
               
chr4:45685661-45685295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
10, 127
               

               
Conread position:
               
217-612
               

               
Cow position:
               
chr4:17774159-17774547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
185, 65
               

               
Conread position:
               
217-621
               

               
Cow position:
               
chr4:38944052-38944471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
98, 230
               

               
Conread position:
               
217-624
               

               
Cow position:
               
chr4:7964441-7964861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
99, 140
               

               
Conread position:
               
217-624
               

               
Cow position:
               
chr4:30778615-30779044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
109, 20
               

               
Conread position:
               
217-631
               

               
Cow position:
               
chr4:18974632-18974216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
217-631
               

               
Cow position:
               
chr4:28771864-28772283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
104, 33
               

               
Conread position:
               
217-632
               

               
Cow position:
               
chr4:11187657-11187242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
217-632
               

               
Cow position:
               
chr4:23450883-23451313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 143
               

               
Conread position:
               
217-632
               

               
Cow position:
               
chr4:34210241-34209809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
217-632
               

               
Cow position:
               
chr4:37915132-37915547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
104, 257
               

               
Conread position:
               
217-632
               

               
Cow position:
               
chr4:52748255-52748675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
217-632
               

               
Cow position:
               
chr4:54191307-54190877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
217-645
               

               
Cow position:
               
chr4:10915628-10916072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
218-400
               

               
Cow position:
               
chr4:2770274-2770091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
103, 13
               

               
Conread position:
               
218-403
               

               
Cow position:
               
chr4:37985937-37985747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 133
               

               
Conread position:
               
218-405
               

               
Cow position:
               
chr4:39010260-39010062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
21, 134
               

               
Conread position:
               
218-420
               

               
Cow position:
               
chr4:32562038-32561825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 128
               

               
Conread position:
               
218-420
               

               
Cow position:
               
chr4:56410550-56410343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 134
               

               
Conread position:
               
218-424
               

               
Cow position:
               
chr4:30769239-30769029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
13, 128
               

               
Conread position:
               
218-469
               

               
Cow position:
               
chr4:31178027-31177772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
95, 135
               

               
Conread position:
               
218-523
               

               
Cow position:
               
chr4:2774929-2774609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 131
               

               
Conread position:
               
218-531
               

               
Cow position:
               
chr4:16513325-16513636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
218-546
               

               
Cow position:
               
chr4:45837424-45837758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 63
               

               
Conread position:
               
218-551
               

               
Cow position:
               
chr4:52780049-52779716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
104, 10
               

               
Conread position:
               
218-597
               

               
Cow position:
               
chr4:34369261-34369635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
218-632
               

               
Cow position:
               
chr4:11099454-11099886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
218-632
               

               
Cow position:
               
chr4:15871537-15871940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
134, 10
               

               
Conread position:
               
218-632
               

               
Cow position:
               
chr4:21065231-21064821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
218-632
               

               
Cow position:
               
chr4:34310260-34310672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 45
               

               
Conread position:
               
218-632
               

               
Cow position:
               
chr4:56591250-56590813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
10, 137
               

               
Conread position:
               
218-645
               

               
Cow position:
               
chr4:34383130-34383567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 136
               

               
Conread position:
               
219-325
               

               
Cow position:
               
chr4:20471084-20470978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
219-325
               

               
Cow position:
               
chr4:23809600-23809704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
219-405
               

               
Cow position:
               
chr4:63261678-63261483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
18, 127
               

               
Conread position:
               
219-410
               

               
Cow position:
               
chr4:3299596-3299782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
219-428
               

               
Cow position:
               
chr4:15236826-15236622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
188, 9
               

               
Conread position:
               
219-438
               

               
Cow position:
               
chr4:26959762-26959993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
100, 128
               

               
Conread position:
               
219-509
               

               
Cow position:
               
chr4:14131626-14131342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
219-537
               

               
Cow position:
               
chr4:22546640-22546959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
102, 13
               

               
Conread position:
               
219-613
               

               
Cow position:
               
chr4:43515927-43515524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
92, 63
               

               
Conread position:
               
219-623
               

               
Cow position:
               
chr4:28839813-28839418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
281, 13
               

               
Conread position:
               
219-624
               

               
Cow position:
               
chr4:46258698-46258276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
107, 17
               

               
Conread position:
               
219-625
               

               
Cow position:
               
chr4:24810248-24810653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
219-628
               

               
Cow position:
               
chr4:12127435-12127856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 127
               

               
Conread position:
               
219-628
               

               
Cow position:
               
chr4:31505813-31506243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
18, 132
               

               
Conread position:
               
219-632
               

               
Cow position:
               
chr4:3341157-3340734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
90, 27
               

               
Conread position:
               
219-632
               

               
Cow position:
               
chr4:9444479-9444907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 17
               

               
Conread position:
               
219-632
               

               
Cow position:
               
chr4:12004422-12004006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
219-632
               

               
Cow position:
               
chr4:18095459-18095896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
219-632
               

               
Cow position:
               
chr4:22138012-22138453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 141
               

               
Conread position:
               
219-632
               

               
Cow position:
               
chr4:24371649-24372068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
28, 216
               

               
Conread position:
               
219-632
               

               
Cow position:
               
chr4:37691108-37691525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
100, 13
               

               
Conread position:
               
219-633
               

               
Cow position:
               
chr4:14414150-14414564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 47
               

               
Conread position:
               
219-637
               

               
Cow position:
               
chr4:202937-203367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 54
               

               
Conread position:
               
220-420
               

               
Cow position:
               
chr4:23059649-23059860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
89, 138
               

               
Conread position:
               
220-423
               

               
Cow position:
               
chr4:22482523-22482317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
44, 121
               

               
Conread position:
               
220-632
               

               
Cow position:
               
chr4:36841462-36841062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
95, 24
               

               
Conread position:
               
221-421
               

               
Cow position:
               
chr4:21112371-21112575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
100, 125
               

               
Conread position:
               
221-601
               

               
Cow position:
               
chr4:22713295-22713681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
221-628
               

               
Cow position:
               
chr4:23444836-23445266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 134
               

               
Conread position:
               
221-630
               

               
Cow position:
               
chr4:8801690-8801292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
122, 16
               

               
Conread position:
               
222-405
               

               
Cow position:
               
chr4:3853680-3853488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
99, 126
               

               
Conread position:
               
222-632
               

               
Cow position:
               
chr4:10025471-10025064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
15, 123
               

               
Conread position:
               
222-632
               

               
Cow position:
               
chr4:19435448-19435043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
223-627
               

               
Cow position:
               
chr4:12031049-12030627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
90, 137
               

               
Conread position:
               
224-420
               

               
Cow position:
               
chr4:67393295-67393089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
12, 136
               

               
Conread position:
               
224-620
               

               
Cow position:
               
chr4:34022389-34022787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
76, 7
               

               
Conread position:
               
227-363
               

               
Cow position:
               
chr4:61214660-61214796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
86, 122
               

               
Conread position:
               
227-504
               

               
Cow position:
               
chr4:66380139-66380429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 133
               

               
Conread position:
               
227-632
               

               
Cow position:
               
chr4:19745065-19744666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 5
               

               
Conread position:
               
227-635
               

               
Cow position:
               
chr4:85890-85475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
93, 141
               

               
Conread position:
               
228-404
               

               
Cow position:
               
chr4:14063101-14063270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
228-405
               

               
Cow position:
               
chr4:25802890-25802703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 123
               

               
Conread position:
               
228-420
               

               
Cow position:
               
chr4:53347785-53347972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
8, 59
               

               
Conread position:
               
228-428
               

               
Cow position:
               
chr4:61608772-61608979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
8, 34
               

               
Conread position:
               
228-449
               

               
Cow position:
               
chr4:7698461-7698231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 119
               

               
Conread position:
               
228-538
               

               
Cow position:
               
chr4:12474047-12473727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
11, 106
               

               
Conread position:
               
228-587
               

               
Cow position:
               
chr4:27632637-27632281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
8, 39
               

               
Conread position:
               
228-588
               

               
Cow position:
               
chr4:16881177-16881536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
7, 36
               

               
Conread position:
               
228-617
               

               
Cow position:
               
chr4:13344731-13344339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
93, 111
               

               
Conread position:
               
228-622
               

               
Cow position:
               
chr4:13284580-13284169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
11, 106
               

               
Conread position:
               
228-627
               

               
Cow position:
               
chr4:51899217-51898791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
10, 173
               

               
Conread position:
               
228-631
               

               
Cow position:
               
chr4:10035100-10034688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
8, 124
               

               
Conread position:
               
228-631
               

               
Cow position:
               
chr4:11004538-11004935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
8, 129
               

               
Conread position:
               
228-631
               

               
Cow position:
               
chr4:27665213-27664789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
8, 136
               

               
Conread position:
               
228-631
               

               
Cow position:
               
chr4:33623909-33623502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
228-632
               

               
Cow position:
               
chr4:12049419-12049026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
162, 31
               

               
Conread position:
               
228-632
               

               
Cow position:
               
chr4:43894614-43895022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
67, 124
               

               
Conread position:
               
228-632
               

               
Cow position:
               
chr4:45582927-45583345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
46, 67
               

               
Conread position:
               
228-632
               

               
Cow position:
               
chr4:55270570-55270978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
8, 133
               

               
Conread position:
               
228-632
               

               
Cow position:
               
chr4:56239669-56240062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
79, 35
               

               
Conread position:
               
229-632
               

               
Cow position:
               
chr4:30574656-30574239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
5, 35
               

               
Conread position:
               
231-560
               

               
Cow position:
               
chr4:37313359-37313025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
231-632
               

               
Cow position:
               
chr4:4186309-4185904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
99, 20
               

               
Conread position:
               
231-632
               

               
Cow position:
               
chr4:19097481-19097074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
232-326
               

               
Cow position:
               
chr4:27521751-27521657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
232-404
               

               
Cow position:
               
chr4:45588240-45588417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 12
               

               
Conread position:
               
232-412
               

               
Cow position:
               
chr4:30691193-30691011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
82, 113
               

               
Conread position:
               
232-413
               

               
Cow position:
               
chr4:46656325-46656135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 128
               

               
Conread position:
               
232-422
               

               
Cow position:
               
chr4:60955512-60955323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
232-452
               

               
Cow position:
               
chr4:54390823-54391055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 128
               

               
Conread position:
               
232-471
               

               
Cow position:
               
chr4:46883476-46883730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
85, 118
               

               
Conread position:
               
232-518
               

               
Cow position:
               
chr4:49019507-49019791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
184, 83
               

               
Conread position:
               
232-522
               

               
Cow position:
               
chr4:46136940-46136644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
83, 113
               

               
Conread position:
               
232-539
               

               
Cow position:
               
chr4:7043626-7043947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
87, 126
               

               
Conread position:
               
232-539
               

               
Cow position:
               
chr4:59873617-59873307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
81, 120
               

               
Conread position:
               
232-580
               

               
Cow position:
               
chr4:41370750-41371105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 217
               

               
Conread position:
               
232-590
               

               
Cow position:
               
chr4:20147376-20147010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
89, 116
               

               
Conread position:
               
232-597
               

               
Cow position:
               
chr4:50769594-50769950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
153, 36
               

               
Conread position:
               
232-610
               

               
Cow position:
               
chr4:51728265-51727877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
176, 235
               

               
Conread position:
               
232-621
               

               
Cow position:
               
chr4:51769296-51768906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
94, 28
               

               
Conread position:
               
232-624
               

               
Cow position:
               
chr4:36929487-36929104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
264, 74
               

               
Conread position:
               
232-626
               

               
Cow position:
               
chr4:48322228-48321817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 67
               

               
Conread position:
               
232-629
               

               
Cow position:
               
chr4:44613196-44612788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 198
               

               
Conread position:
               
232-631
               

               
Cow position:
               
chr4:22249277-22249662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
175, 39
               

               
Conread position:
               
232-631
               

               
Cow position:
               
chr4:34631098-34630685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
67, 189
               

               
Conread position:
               
232-631
               

               
Cow position:
               
chr4:51851404-51850980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
11, 224
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr4:3388733-3388327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 33
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr4:12561210-12560819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
190, 67
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr4:12676986-12676595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
73, 216
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr4:13668427-13668834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
85, 119
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr4:13693483-13693895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr4:22860536-22860923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
155, 70
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr4:26659491-26659088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
88, 210
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr4:30974525-30974119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 116
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr4:31023640-31023224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr4:33970714-33971113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
220, 11
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr4:34641532-34641946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
76, 118
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr4:48152180-48152585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
232-632
               

               
Cow position:
               
chr4:49794841-49794462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
232-633
               

               
Cow position:
               
chr4:3440584-3440188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
42, 104
               

               
Conread position:
               
232-633
               

               
Cow position:
               
chr4:31348009-31348412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
173, 74
               

               
Conread position:
               
232-633
               

               
Cow position:
               
chr4:56570982-56570586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
176, 74
               

               
Conread position:
               
232-633
               

               
Cow position:
               
chr4:58834226-58834624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
176, 33
               

               
Conread position:
               
232-645
               

               
Cow position:
               
chr4:1985842-1985419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
94, 127
               

               
Conread position:
               
232-645
               

               
Cow position:
               
chr4:12591029-12591441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
84, 10
               

               
Conread position:
               
233-420
               

               
Cow position:
               
chr4:42347677-42347482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 116
               

               
Conread position:
               
233-455
               

               
Cow position:
               
chr4:50687675-50687902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
68, 114
               

               
Conread position:
               
233-539
               

               
Cow position:
               
chr4:14994364-14994030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 130
               

               
Conread position:
               
233-562
               

               
Cow position:
               
chr4:45250163-45249829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
233-632
               

               
Cow position:
               
chr4:961475-961880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
173, 74
               

               
Conread position:
               
233-632
               

               
Cow position:
               
chr4:44496552-44496167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
100, 58
               

               
Conread position:
               
233-632
               

               
Cow position:
               
chr4:48486186-48485783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
80, 181
               

               
Conread position:
               
233-632
               

               
Cow position:
               
chr4:62472266-62471851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
88, 49
               

               
Conread position:
               
234-405
               

               
Cow position:
               
chr4:66168149-66168320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
161, 106
               

               
Conread position:
               
234-593
               

               
Cow position:
               
chr4:17186159-17186531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
35, 213
               

               
Conread position:
               
234-630
               

               
Cow position:
               
chr4:25354717-25354339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
65, 125
               

               
Conread position:
               
234-632
               

               
Cow position:
               
chr4:19709132-19708724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
93, 125
               

               
Conread position:
               
236-539
               

               
Cow position:
               
chr4:34699857-34700162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
133, 70
               

               
Conread position:
               
236-545
               

               
Cow position:
               
chr4:19102689-19103006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
69, 116
               

               
Conread position:
               
236-546
               

               
Cow position:
               
chr4:46494488-46494166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
236-554
               

               
Cow position:
               
chr4:54871836-54872166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 124
               

               
Conread position:
               
236-580
               

               
Cow position:
               
chr4:19500901-19501249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
236-593
               

               
Cow position:
               
chr4:3421811-3421449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
79, 214
               

               
Conread position:
               
236-624
               

               
Cow position:
               
chr4:46527191-46526791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
85, 122
               

               
Conread position:
               
236-632
               

               
Cow position:
               
chr4:19597145-19597532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
166, 63
               

               
Conread position:
               
236-632
               

               
Cow position:
               
chr4:25370281-25369899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
177, 70
               

               
Conread position:
               
236-632
               

               
Cow position:
               
chr4:27276358-27276758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
236-632
               

               
Cow position:
               
chr4:38935545-38935141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
74, 33
               

               
Conread position:
               
236-632
               

               
Cow position:
               
chr4:40822943-40823332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
178, 63
               

               
Conread position:
               
236-632
               

               
Cow position:
               
chr4:68234150-68233761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 52
               

               
Conread position:
               
236-649
               

               
Cow position:
               
chr4:29384054-29384451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
167, 105
               

               
Conread position:
               
236-650
               

               
Cow position:
               
chr4:13221993-13222411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
48, 118
               

               
Conread position:
               
237-531
               

               
Cow position:
               
chr4:44183934-44184229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 49
               

               
Conread position:
               
237-613
               

               
Cow position:
               
chr4:19407805-19408198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
56, 47
               

               
Conread position:
               
237-631
               

               
Cow position:
               
chr4:23509777-23509372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 29
               

               
Conread position:
               
237-632
               

               
Cow position:
               
chr4:13590273-13589871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
68, 122
               

               
Conread position:
               
237-632
               

               
Cow position:
               
chr4:19700293-19699883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
61, 232
               

               
Conread position:
               
241-615
               

               
Cow position:
               
chr4:27344500-27344871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 54
               

               
Conread position:
               
241-631
               

               
Cow position:
               
chr4:46455884-46456265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 33
               

               
Conread position:
               
242-632
               

               
Cow position:
               
chr4:3837449-3837062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
112, 45
               

               
Conread position:
               
242-645
               

               
Cow position:
               
chr4:4320812-4321236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 103
               

               
Conread position:
               
243-550
               

               
Cow position:
               
chr4:41186221-41186535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
162, 99
               

               
Conread position:
               
243-629
               

               
Cow position:
               
chr4:43740711-43740307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 101
               

               
Conread position:
               
243-630
               

               
Cow position:
               
chr4:31004232-31004620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
243-631
               

               
Cow position:
               
chr4:10732401-10732002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 217
               

               
Conread position:
               
243-632
               

               
Cow position:
               
chr4:8770274-8769892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
70, 97
               

               
Conread position:
               
243-632
               

               
Cow position:
               
chr4:23646690-23647060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 66
               

               
Conread position:
               
243-632
               

               
Cow position:
               
chr4:34165806-34166192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
64, 56
               

               
Conread position:
               
243-632
               

               
Cow position:
               
chr4:60897113-60897490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
254, 55
               

               
Conread position:
               
243-645
               

               
Cow position:
               
chr4:15905286-15904868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 239
               

               
Conread position:
               
244-562
               

               
Cow position:
               
chr4:54171804-54171475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
65, 99
               

               
Conread position:
               
244-632
               

               
Cow position:
               
chr4:47349000-47348615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
51, 6
               

               
Conread position:
               
246-584
               

               
Cow position:
               
chr4:54478737-54479073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 86
               

               
Conread position:
               
246-631
               

               
Cow position:
               
chr4:46550566-46550168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 23
               

               
Conread position:
               
246-632
               

               
Cow position:
               
chr4:5609914-5610292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
114, 84
               

               
Conread position:
               
246-632
               

               
Cow position:
               
chr4:21531463-21531858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
64, 347
               

               
Conread position:
               
246-632
               

               
Cow position:
               
chr4:26323921-26323516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 113
               

               
Conread position:
               
246-632
               

               
Cow position:
               
chr4:40414451-40414848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
69, 230
               

               
Conread position:
               
246-632
               

               
Cow position:
               
chr4:45775153-45775559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
54, 109
               

               
Conread position:
               
246-632
               

               
Cow position:
               
chr4:53208460-53208084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
137, 60
               

               
Conread position:
               
246-632
               

               
Cow position:
               
chr4:66172618-66173015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 214
               

               
Conread position:
               
246-643
               

               
Cow position:
               
chr4:63349298-63349702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
74, 193
               

               
Conread position:
               
246-645
               

               
Cow position:
               
chr4:22009885-22010289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
248-568
               

               
Cow position:
               
chr4:44449349-44449659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
155, 15
               

               
Conread position:
               
248-632
               

               
Cow position:
               
chr4:45662330-45662717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
13, 140
               

               
Conread position:
               
249-633
               

               
Cow position:
               
chr4:42423631-42424020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 200
               

               
Conread position:
               
251-620
               

               
Cow position:
               
chr4:16594248-16593878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 28
               

               
Conread position:
               
253-536
               

               
Cow position:
               
chr4:5577044-5577324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
75, 100
               

               
Conread position:
               
255-632
               

               
Cow position:
               
chr4:17052417-17052815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
55, 108
               

               
Conread position:
               
256-449
               

               
Cow position:
               
chr4:3268203-3268398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
257-632
               

               
Cow position:
               
chr4:28836704-28836309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
68, 212
               

               
Conread position:
               
264-632
               

               
Cow position:
               
chr4:25888684-25889050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
150, 51
               

               
Conread position:
               
264-632
               

               
Cow position:
               
chr4:38999584-38999209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
59, 85
               

               
Conread position:
               
265-630
               

               
Cow position:
               
chr4:6653882-6653517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
35, 84
               

               
Conread position:
               
267-632
               

               
Cow position:
               
chr4:15624001-15623623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
45, 32
               

               
Conread position:
               
268-632
               

               
Cow position:
               
chr4:36893523-36893136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
41, 69
               

               
Conread position:
               
271-632
               

               
Cow position:
               
chr4:20157272-20157629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
134, 43
               

               
Conread position:
               
271-632
               

               
Cow position:
               
chr4:63964839-63965208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
44, 149
               

               
Conread position:
               
272-632
               

               
Cow position:
               
chr4:13256226-13255876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
48, 65
               

               
Conread position:
               
277-632
               

               
Cow position:
               
chr4:7571556-7571192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
277-632
               

               
Cow position:
               
chr4:23600315-23599953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
38, 122
               

               
Conread position:
               
279-632
               

               
Cow position:
               
chr4:37344290-37344650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
129, 72
               

               
Conread position:
               
285-632
               

               
Cow position:
               
chr4:2602374-2602013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
24, 138
               

               
Conread position:
               
294-632
               

               
Cow position:
               
chr4:11194308-11193965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 41
               

               
Conread position:
               
294-645
               

               
Cow position:
               
chr4:26401077-26400726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
208, 27
               

               
Conread position:
               
298-632
               

               
Cow position:
               
chr4:42921741-42922063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
164, 43
               

               
Conread position:
               
299-631
               

               
Cow position:
               
chr4:39128655-39128315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
154, 42
               

               
Conread position:
               
299-632
               

               
Cow position:
               
chr4:19542250-19541909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
150, 42
               

               
Conread position:
               
299-632
               

               
Cow position:
               
chr4:22344903-22345232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
109, 68
               

               
Conread position:
               
299-632
               

               
Cow position:
               
chr4:45367857-45367516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
299-632
               

               
Cow position:
               
chr4:65650015-65650342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
35, 43
               

               
Conread position:
               
299-637
               

               
Cow position:
               
chr4:13973850-13974194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
300-627
               

               
Cow position:
               
chr4:10056323-10055999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
9, 43
               

               
Conread position:
               
301-643
               

               
Cow position:
               
chr4:45589485-45589819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
120, 40
               

               
Conread position:
               
304-632
               

               
Cow position:
               
chr4:62771804-62772151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
316-632
               

               
Cow position:
               
chr4:41602951-41602631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
25, 17
               

               
Conread position:
               
316-632
               

               
Cow position:
               
chr4:63459122-63459433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
181, 17
               

               
Conread position:
               
317-631
               

               
Cow position:
               
chr4:25984321-25984012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
44, 94
               

               
Conread position:
               
318-635
               

               
Cow position:
               
chr4:5999096-5999417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
319-630
               

               
Cow position:
               
chr4:45738376-45738699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
95, 88
               

               
Conread position:
               
319-632
               

               
Cow position:
               
chr4:3850650-3850335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
89, 132
               

               
Conread position:
               
319-632
               

               
Cow position:
               
chr4:12903920-12903601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
89, 126
               

               
Conread position:
               
319-632
               

               
Cow position:
               
chr4:53100900-53100588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
95, 88
               

               
Conread position:
               
319-645
               

               
Cow position:
               
chr4:58880863-58881197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
84, 16
               

               
Conread position:
               
320-632
               

               
Cow position:
               
chr4:5460764-5461077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 29
               

               
Conread position:
               
320-632
               

               
Cow position:
               
chr4:16736615-16736286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
320-632
               

               
Cow position:
               
chr4:27755206-27755518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
84, 104
               

               
Conread position:
               
320-632
               

               
Cow position:
               
chr4:36731288-36730973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
88, 129
               

               
Conread position:
               
320-632
               

               
Cow position:
               
chr4:41300900-41301208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
320-632
               

               
Cow position:
               
chr4:44838797-44839102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
321-568
               

               
Cow position:
               
chr4:59378005-59377761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 20
               

               
Conread position:
               
321-631
               

               
Cow position:
               
chr4:18255948-18255647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
25, 20
               

               
Conread position:
               
321-632
               

               
Cow position:
               
chr4:41441661-41441348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
321-632
               

               
Cow position:
               
chr4:45644222-45644529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
322-631
               

               
Cow position:
               
chr4:37704361-37704049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
73, 146
               

               
Conread position:
               
323-620
               

               
Cow position:
               
chr4:30792062-30791759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 18
               

               
Conread position:
               
323-627
               

               
Cow position:
               
chr4:8705088-8704772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
323-628
               

               
Cow position:
               
chr4:15462157-15462487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 18
               

               
Conread position:
               
323-631
               

               
Cow position:
               
chr4:51784273-51783965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
323-632
               

               
Cow position:
               
chr4:19321984-19322296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 18
               

               
Conread position:
               
323-632
               

               
Cow position:
               
chr4:25879484-25879178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
175, 18
               

               
Conread position:
               
323-632
               

               
Cow position:
               
chr4:43865763-43866068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
323-632
               

               
Cow position:
               
chr4:44782468-44782157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
323-632
               

               
Cow position:
               
chr4:46591761-46591442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
323-632
               

               
Cow position:
               
chr4:46597462-46597165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
175, 26
               

               
Conread position:
               
324-632
               

               
Cow position:
               
chr4:32726317-32726005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
324-632
               

               
Cow position:
               
chr4:55395855-55395551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
324-645
               

               
Cow position:
               
chr4:65815614-65815922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
325-631
               

               
Cow position:
               
chr4:33395606-33395906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
325-632
               

               
Cow position:
               
chr4:1495317-1495617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
175, 16
               

               
Conread position:
               
325-636
               

               
Cow position:
               
chr4:47351895-47351583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
83, 28
               

               
Conread position:
               
327-645
               

               
Cow position:
               
chr4:59008264-59008600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
6, 15
               

               
Conread position:
               
328-631
               

               
Cow position:
               
chr4:36813467-36813156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
332-632
               

               
Cow position:
               
chr4:123124-123418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
56, 65
               

               
Conread position:
               
334-632
               

               
Cow position:
               
chr4:17111790-17112094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 50
               

               
Conread position:
               
334-635
               

               
Cow position:
               
chr4:17474522-17474218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
337-632
               

               
Cow position:
               
chr4:16601982-16602269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
144, 93
               

               
Conread position:
               
337-632
               

               
Cow position:
               
chr4:16799105-16799410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 115
               

               
Conread position:
               
337-645
               

               
Cow position:
               
chr4:21257044-21257359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
339-632
               

               
Cow position:
               
chr4:54930343-54930633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
340-632
               

               
Cow position:
               
chr4:13406786-13406489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
342-632
               

               
Cow position:
               
chr4:65841690-65841979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
62, 73
               

               
Conread position:
               
345-632
               

               
Cow position:
               
chr4:44973707-44973425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
346-627
               

               
Cow position:
               
chr4:23854252-23853992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
105, 61
               

               
Conread position:
               
349-632
               

               
Cow position:
               
chr4:10037485-10037193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
50, 65
               

               
Conread position:
               
350-632
               

               
Cow position:
               
chr4:25806967-25806682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
96, 72
               

               
Conread position:
               
351-632
               

               
Cow position:
               
chr4:21232807-21233088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
352-628
               

               
Cow position:
               
chr4:4672270-4672548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
70, 55
               

               
Conread position:
               
352-631
               

               
Cow position:
               
chr4:2894097-2893808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
352-631
               

               
Cow position:
               
chr4:14352623-14352897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 51
               

               
Conread position:
               
352-645
               

               
Cow position:
               
chr4:14920055-14919769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
62, 45
               

               
Conread position:
               
352-645
               

               
Cow position:
               
chr4:39456105-39455824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
187, 55
               

               
Conread position:
               
355-632
               

               
Cow position:
               
chr4:11021588-11021867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 216
               

               
Conread position:
               
356-627
               

               
Cow position:
               
chr4:66112009-66112289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
60, 51
               

               
Conread position:
               
358-630
               

               
Cow position:
               
chr4:10905405-10905674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
43, 100
               

               
Conread position:
               
358-631
               

               
Cow position:
               
chr4:21371451-21371178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
50, 92
               

               
Conread position:
               
358-632
               

               
Cow position:
               
chr4:51867052-51866778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
131, 100
               

               
Conread position:
               
359-632
               

               
Cow position:
               
chr4:39231462-39231740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
49, 96
               

               
Conread position:
               
359-645
               

               
Cow position:
               
chr4:14470512-14470801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
44, 8
               

               
Conread position:
               
361-631
               

               
Cow position:
               
chr4:51739660-51739919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
139, 43
               

               
Conread position:
               
362-631
               

               
Cow position:
               
chr4:20299330-20299054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
362-645
               

               
Cow position:
               
chr4:24744349-24744643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
5, 83
               

               
Conread position:
               
365-624
               

               
Cow position:
               
chr4:67445198-67444934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 90
               

               
Conread position:
               
366-579
               

               
Cow position:
               
chr4:38705721-38705940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
366-632
               

               
Cow position:
               
chr4:38799149-38799412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
366-635
               

               
Cow position:
               
chr4:29237118-29237373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
132, 9
               

               
Conread position:
               
368-622
               

               
Cow position:
               
chr4:1354575-1354821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 87
               

               
Conread position:
               
370-632
               

               
Cow position:
               
chr4:35939959-35940229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 85
               

               
Conread position:
               
371-632
               

               
Cow position:
               
chr4:24688298-24688566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 113
               

               
Conread position:
               
373-632
               

               
Cow position:
               
chr4:20139470-20139737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
379-632
               

               
Cow position:
               
chr4:44024785-44025035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 24
               

               
Conread position:
               
382-626
               

               
Cow position:
               
chr4:13832575-13832811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
384-619
               

               
Cow position:
               
chr4:28543578-28543805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
159, 23
               

               
Conread position:
               
384-632
               

               
Cow position:
               
chr4:37619854-37620105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
24, 73
               

               
Conread position:
               
386-630
               

               
Cow position:
               
chr4:5188981-5189222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 86
               

               
Conread position:
               
391-631
               

               
Cow position:
               
chr4:2610257-2610020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 18
               

               
Conread position:
               
396-617
               

               
Cow position:
               
chr4:19558738-19558513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
399-632
               

               
Cow position:
               
chr4:43749796-43750029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
399-633
               

               
Cow position:
               
chr4:5984029-5984263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
144, 39
               

               
Conread position:
               
400-632
               

               
Cow position:
               
chr4:24118889-24119126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
8, 62
               

               
Conread position:
               
400-632
               

               
Cow position:
               
chr4:26746495-26746267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
89, 6
               

               
Conread position:
               
400-632
               

               
Cow position:
               
chr4:47290090-47289853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
97, 6
               

               
Conread position:
               
401-645
               

               
Cow position:
               
chr4:53546044-53545802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
21, 49
               

               
Conread position:
               
402-632
               

               
Cow position:
               
chr4:11671464-11671235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
96, 51
               

               
Conread position:
               
402-632
               

               
Cow position:
               
chr4:27687939-27687706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
7, 11
               

               
Conread position:
               
402-632
               

               
Cow position:
               
chr4:65538405-65538625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
103, 24
               

               
Conread position:
               
402-645
               

               
Cow position:
               
chr4:11901547-11901793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
19, 53
               

               
Conread position:
               
402-645
               

               
Cow position:
               
chr4:22849702-22849940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
411-631
               

               
Cow position:
               
chr4:16637601-16637815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
128, 43
               

               
Conread position:
               
411-631
               

               
Cow position:
               
chr4:36725044-36724826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 180
               

               
Conread position:
               
411-632
               

               
Cow position:
               
chr4:48137915-48137692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
37, 45
               

               
Conread position:
               
411-646
               

               
Cow position:
               
chr4:34924687-34924925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
132, 37
               

               
Conread position:
               
412-632
               

               
Cow position:
               
chr4:1915576-1915795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
44, 64
               

               
Conread position:
               
412-632
               

               
Cow position:
               
chr4:56233684-56233470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
414-588
               

               
Cow position:
               
chr4:38887126-38887310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
8, 49
               

               
Conread position:
               
414-632
               

               
Cow position:
               
chr4:49089791-49089577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
84, 129
               

               
Conread position:
               
431-632
               

               
Cow position:
               
chr4:54501461-54501666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
432-632
               

               
Cow position:
               
chr4:53833028-53832828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
145, 18
               

               
Conread position:
               
443-632
               

               
Cow position:
               
chr4:49993044-49992870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
444-631
               

               
Cow position:
               
chr4:43909716-43909536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
445-632
               

               
Cow position:
               
chr4:61215025-61215215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 131
               

               
Conread position:
               
446-611
               

               
Cow position:
               
chr4:29813572-29813737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
447-632
               

               
Cow position:
               
chr4:1237146-1237334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
447-632
               

               
Cow position:
               
chr4:44072796-44072987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
451-632
               

               
Cow position:
               
chr4:23911615-23911806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
10, 183
               

               
Conread position:
               
453-629
               

               
Cow position:
               
chr4:46668532-46668356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
456-632
               

               
Cow position:
               
chr4:54667727-54667908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
457-630
               

               
Cow position:
               
chr4:46708565-46708743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 64
               

               
Conread position:
               
458-632
               

               
Cow position:
               
chr4:11090740-11090904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
458-632
               

               
Cow position:
               
chr4:19561643-19561477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
45, 113
               

               
Conread position:
               
458-632
               

               
Cow position:
               
chr4:43495861-43495684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
458-632
               

               
Cow position:
               
chr4:57555930-57555749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
459-633
               

               
Cow position:
               
chr4:67392918-67392751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
7, 118
               

               
Conread position:
               
463-630
               

               
Cow position:
               
chr4:40410173-40410335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
463-631
               

               
Cow position:
               
chr4:3475581-3475415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
463-632
               

               
Cow position:
               
chr4:33421405-33421579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
463-632
               

               
Cow position:
               
chr4:46370769-46370593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
464-643
               

               
Cow position:
               
chr4:25359563-25359380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
470-631
               

               
Cow position:
               
chr4:16091452-16091616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
470-631
               

               
Cow position:
               
chr4:53999562-53999723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
470-632
               

               
Cow position:
               
chr4:12259834-12259998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
470-632
               

               
Cow position:
               
chr4:19542743-19542579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 118
               

               
Conread position:
               
470-632
               

               
Cow position:
               
chr4:23060049-23060220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
470-632
               

               
Cow position:
               
chr4:43369905-43370067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
19, 107
               

               
Conread position:
               
470-632
               

               
Cow position:
               
chr4:53447721-53447883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
73, 102
               

               
Conread position:
               
470-632
               

               
Cow position:
               
chr4:65168058-65168226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
470-637
               

               
Cow position:
               
chr4:65730972-65731141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 163
               

               
Conread position:
               
473-632
               

               
Cow position:
               
chr4:41292038-41292197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
110, 25
               

               
Conread position:
               
475-632
               

               
Cow position:
               
chr4:56852845-56852680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 87
               

               
Conread position:
               
476-628
               

               
Cow position:
               
chr4:42232599-42232451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 112
               

               
Conread position:
               
476-632
               

               
Cow position:
               
chr4:21064064-21064221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
481-632
               

               
Cow position:
               
chr4:22259490-22259637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 53
               

               
Conread position:
               
481-632
               

               
Cow position:
               
chr4:22744260-22744104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
481-632
               

               
Cow position:
               
chr4:46275128-46274976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 86
               

               
Conread position:
               
490-637
               

               
Cow position:
               
chr4:7249642-7249790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
8, 103
               

               
Conread position:
               
493-632
               

               
Cow position:
               
chr4:2536753-2536615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
493-632
               

               
Cow position:
               
chr4:19497330-19497467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
493-632
               

               
Cow position:
               
chr4:24458175-24458315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 111
               

               
Conread position:
               
493-645
               

               
Cow position:
               
chr4:10412299-10412148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
494-632
               

               
Cow position:
               
chr4:56514015-56514156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
96, 54
               

               
Conread position:
               
495-612
               

               
Cow position:
               
chr4:3689627-3689511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
495-622
               

               
Cow position:
               
chr4:46058832-46058958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
495-630
               

               
Cow position:
               
chr4:69406291-69406153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 49
               

               
Conread position:
               
495-631
               

               
Cow position:
               
chr4:18576854-18576992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 51
               

               
Conread position:
               
495-631
               

               
Cow position:
               
chr4:19463415-19463275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
495-631
               

               
Cow position:
               
chr4:41907872-41908008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr4:620230-620371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr4:2141665-2141528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
42, 50
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr4:11201739-11201600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
44, 84
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr4:11871988-11872129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr4:19142213-19142071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr4:19582697-19582832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr4:22528467-22528605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr4:27292036-27292176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 117
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr4:33612439-33612580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr4:39009886-39009748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr4:51083438-51083579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
495-633
               

               
Cow position:
               
chr4:21365326-21365187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
495-645
               

               
Cow position:
               
chr4:22051553-22051699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
48, 25
               

               
Conread position:
               
497-631
               

               
Cow position:
               
chr4:53209157-53209019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
497-632
               

               
Cow position:
               
chr4:3251614-3251753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 48
               

               
Conread position:
               
497-632
               

               
Cow position:
               
chr4:33357852-33357714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 121
               

               
Conread position:
               
500-625
               

               
Cow position:
               
chr4:29842804-29842675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 7
               

               
Conread position:
               
501-625
               

               
Cow position:
               
chr4:13608158-13608029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
501-632
               

               
Cow position:
               
chr4:22072756-22072890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
503-631
               

               
Cow position:
               
chr4:480093-480223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
503-637
               

               
Cow position:
               
chr4:30690633-30690503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 61
               

               
Conread position:
               
503-645
               

               
Cow position:
               
chr4:56410100-56409951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
505-631
               

               
Cow position:
               
chr4:34337357-34337486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
505-632
               

               
Cow position:
               
chr4:19438370-19438241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
505-632
               

               
Cow position:
               
chr4:27540531-27540404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
505-632
               

               
Cow position:
               
chr4:63813395-63813519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
54, 77
               

               
Conread position:
               
510-632
               

               
Cow position:
               
chr4:37465679-37465801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
35, 107
               

               
Conread position:
               
512-632
               

               
Cow position:
               
chr4:46385669-46385795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
535-632
               

               
Cow position:
               
chr4:52177533-52177434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
535-645
               

               
Cow position:
               
chr4:53763239-53763348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               
Show alignments to all cow chromosomes.