Cow genome map

Conread name: Ss1.1-Pig4-TMW8034E14.3

Conread position: 1-143
Cow position: chr14:44889117-44889254 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 1-157
Cow position: chr14:2288372-2288224 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-161
Cow position: chr14:37256273-37256122 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 1-162
Cow position: chr14:31684568-31684724 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 133
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-172
Cow position: chr14:35931490-35931324 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr14:30582006-30582171 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chr14:42121461-42121632 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 59

Conread position: 1-175
Cow position: chr14:48252210-48252376 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:1660568-1660402 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:7988629-7988462 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:9450418-9450585 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:13237688-13237867 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 131

Conread position: 1-176
Cow position: chr14:17489212-17489381 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:19549311-19549144 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:22104441-22104611 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:23255225-23255395 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:29773999-29774166 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chr14:30713667-30713837 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:34763038-34763208 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:38434999-38434832 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:38460339-38460509 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:44260580-44260405 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 61, 38

Conread position: 1-176
Cow position: chr14:44553939-44553773 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 1-176
Cow position: chr14:45026841-45027009 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:46222197-46222027 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:46389146-46389313 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 39

Conread position: 1-176
Cow position: chr14:46406430-46406260 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 127, 13

Conread position: 1-176
Cow position: chr14:46503804-46503638 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr14:46638741-46638574 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr14:13781977-13781809 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr14:13861404-13861575 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 144
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr14:16997923-16998090 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr14:30665472-30665636 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 1-177
Cow position: chr14:43560346-43560179 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr14:44691295-44691125 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 1-177
Cow position: chr14:46123245-46123073 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 143
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 67, 38

Conread position: 1-180
Cow position: chr14:192167-191995 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:5531451-5531280 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:11151801-11151964 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:11835748-11835573 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 39

Conread position: 1-180
Cow position: chr14:12740928-12741102 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:13305220-13305046 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr14:13463546-13463379 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 1-180
Cow position: chr14:16917613-16917786 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:19326144-19326317 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:22029352-22029526 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr14:28210014-28209840 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:32449076-32448902 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:32473026-32473201 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 1-180
Cow position: chr14:32584914-32585083 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:34668673-34668848 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 118, 38

Conread position: 1-180
Cow position: chr14:34904469-34904296 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr14:35383532-35383700 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:37226273-37226099 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:41411862-41411687 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 5

Conread position: 1-180
Cow position: chr14:45087320-45087147 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr14:45187714-45187880 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr14:48827393-48827218 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 120, 38

Conread position: 1-180
Cow position: chr14:50113481-50113311 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 1-182
Cow position: chr14:46434733-46434558 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 2-169
Cow position: chr14:9512794-9512956 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 31

Conread position: 2-175
Cow position: chr14:40719704-40719866 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 2-176
Cow position: chr14:29045567-29045730 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 2-176
Cow position: chr14:38813361-38813530 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 2-177
Cow position: chr14:20563626-20563796 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 2-180
Cow position: chr14:9849788-9849952 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr14:13580944-13580775 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr14:30594092-30594263 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 3-176
Cow position: chr14:39772440-39772272 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 120, 32

Conread position: 3-177
Cow position: chr14:26457243-26457077 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chr14:43557072-43556901 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chr14:44254654-44254824 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 4-180
Cow position: chr14:36908092-36908263 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 105, 40

Conread position: 5-180
Cow position: chr14:15273441-15273610 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 6-180
Cow position: chr14:46469080-46469246 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 163, 33

Conread position: 6-181
Cow position: chr14:3083841-3084011 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 34

Conread position: 7-180
Cow position: chr14:11475179-11475347 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 8-180
Cow position: chr14:37982196-37982369 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 9

Conread position: 14-150
Cow position: chr14:40511758-40511628 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 14-180
Cow position: chr14:30737454-30737296 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 15-176
Cow position: chr14:20784689-20784536 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 19-180
Cow position: chr14:38149209-38149052 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 20

Conread position: 20-180
Cow position: chr14:31150423-31150265 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 19

Conread position: 20-180
Cow position: chr14:33679177-33679022 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 21-175
Cow position: chr14:44291163-44291013 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 9, 24

Conread position: 21-180
Cow position: chr14:40344408-40344254 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 22-180
Cow position: chr14:41272098-41272251 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 23-180
Cow position: chr14:39299716-39299570 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 31-180
Cow position: chr14:13275402-13275259 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 92, 27

Conread position: 35-180
Cow position: chr14:5515018-5514877 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 36-180
Cow position: chr14:11563641-11563501 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 36-180
Cow position: chr14:35427629-35427486 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 44-175
Cow position: chr14:16807247-16807373 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 57-176
Cow position: chr14:33490889-33490772 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 59-174
Cow position: chr14:43562867-43562751 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 59-180
Cow position: chr14:2296549-2296428 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 59-180
Cow position: chr14:17688912-17688791 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 59-180
Cow position: chr14:41444393-41444272 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 68-176
Cow position: chr14:40385868-40385976 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.