Cow genome map

Conread name: Ss1.1-Pig4-TMW8034E14.3

Conread position: 1-137
Cow position: chr22:30676268-30676396 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 1-151
Cow position: chr22:9731643-9731788 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr22:25969180-25969332 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 110, 43

Conread position: 1-162
Cow position: chr22:44479216-44479058 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 140, 39

Conread position: 1-165
Cow position: chr22:45014584-45014738 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 1-174
Cow position: chr22:6500468-6500636 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 38

Conread position: 1-174
Cow position: chr22:44100883-44101044 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 1-175
Cow position: chr22:696386-696217 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr22:539590-539423 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr22:980747-980579 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 123, 36

Conread position: 1-176
Cow position: chr22:5888720-5888892 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 116, 43

Conread position: 1-176
Cow position: chr22:8132326-8132493 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr22:10907742-10907909 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 104, 43

Conread position: 1-176
Cow position: chr22:11802590-11802760 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr22:15277837-15277667 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr22:18029733-18029564 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr22:21193741-21193911 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 119, 43

Conread position: 1-176
Cow position: chr22:24818292-24818462 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 58

Conread position: 1-176
Cow position: chr22:27307508-27307676 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 168, 38

Conread position: 1-176
Cow position: chr22:27512955-27512788 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 92, 38

Conread position: 1-176
Cow position: chr22:28713135-28712968 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr22:28998073-28998243 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chr22:29854313-29854148 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr22:35669206-35669376 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr22:43235302-43235136 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr22:44367019-44367189 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr22:44398894-44398724 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 1-177
Cow position: chr22:1482872-1482704 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr22:1518570-1518739 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 1-177
Cow position: chr22:3304195-3304362 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 149, 38

Conread position: 1-177
Cow position: chr22:15954572-15954743 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr22:21591883-21591716 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr22:26105692-26105860 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr22:28555709-28555880 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr22:30068009-30068181 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 32, 57

Conread position: 1-177
Cow position: chr22:37269555-37269387 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr22:39039516-39039681 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 123, 37

Conread position: 1-177
Cow position: chr22:39467054-39467221 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 1-177
Cow position: chr22:41847092-41847259 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:50498-50323 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:324698-324876 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 122, 38

Conread position: 1-180
Cow position: chr22:558245-558416 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:2562303-2562477 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr22:3806109-3805934 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 161, 38

Conread position: 1-180
Cow position: chr22:5014564-5014388 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 161, 38

Conread position: 1-180
Cow position: chr22:5931628-5931790 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 1-180
Cow position: chr22:6334269-6334101 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:7154750-7154921 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:8118783-8118955 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:8735259-8735431 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:10933767-10933936 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:11609102-11608928 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:13662915-13662743 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:15309499-15309667 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:15853895-15853724 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:17326023-17326196 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr22:18813563-18813738 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 126, 38

Conread position: 1-180
Cow position: chr22:20238376-20238547 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:22934022-22934195 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:22956853-22957024 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:28784577-28784403 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:31315000-31314826 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 162, 38

Conread position: 1-180
Cow position: chr22:31332415-31332596 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 126, 38

Conread position: 1-180
Cow position: chr22:34170800-34170626 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:34604678-34604507 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:35904707-35904879 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 53

Conread position: 1-180
Cow position: chr22:36186088-36185914 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr22:36356528-36356358 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 1-180
Cow position: chr22:36859090-36859261 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:37537015-37537188 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 114, 49

Conread position: 1-180
Cow position: chr22:40588864-40588696 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:42993635-42993461 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:43046894-43047068 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 35

Conread position: 1-180
Cow position: chr22:44516704-44516878 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr22:44936401-44936227 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 126, 38

Conread position: 1-180
Cow position: chr22:48272554-48272741 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 38

Conread position: 1-181
Cow position: chr22:19141230-19141402 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 2-168
Cow position: chr22:41473228-41473390 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 37

Conread position: 2-180
Cow position: chr22:41242889-41242718 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 3-174
Cow position: chr22:19019240-19019405 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 3-175
Cow position: chr22:17994854-17995021 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr22:10549100-10548935 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr22:10578030-10578198 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 140
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr22:36544495-36544663 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr22:36585385-36585553 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 5-180
Cow position: chr22:13774959-13774798 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 6-175
Cow position: chr22:3275895-3276059 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 137
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 33, 0

Conread position: 6-180
Cow position: chr22:7278996-7278832 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 8-176
Cow position: chr22:45280393-45280233 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 8-180
Cow position: chr22:12729239-12729401 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 14-180
Cow position: chr22:11806307-11806463 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 14-180
Cow position: chr22:32205511-32205353 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 21-176
Cow position: chr22:3515888-3516040 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 18

Conread position: 35-180
Cow position: chr22:36277996-36277855 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 52-180
Cow position: chr22:18604384-18604512 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 67, 119

Conread position: 59-173
Cow position: chr22:36271544-36271430 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 59-180
Cow position: chr22:44460073-44459953 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 20

Conread position: 62-176
Cow position: chr22:40384241-40384128 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 65-176
Cow position: chr22:18614686-18614575 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 66-176
Cow position: chr22:2391135-2391245 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.