Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8034E14.3 |
| Conread position: | 1-150 |
| Cow position: | chr25:32578418-32578562 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-151 |
| Cow position: | chr25:17586777-17586917 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-163 |
| Cow position: | chr25:12835326-12835482 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-176 |
| Cow position: | chr25:13352210-13352040 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr25:14537421-14537591 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr25:18191147-18191314 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-176 |
| Cow position: | chr25:19338074-19338244 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr25:19923057-19922889 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-176 |
| Cow position: | chr25:20773091-20773261 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-176 |
| Cow position: | chr25:23360428-23360258 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 122, 42 |
| Conread position: | 1-176 |
| Cow position: | chr25:27020090-27020260 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr25:29359270-29359103 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr25:29803538-29803705 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr25:34510506-34510672 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr25:34674155-34673988 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr25:35552931-35552761 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-177 |
| Cow position: | chr25:11658645-11658474 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 137, 38 |
| Conread position: | 1-180 |
| Cow position: | chr25:10635026-10635200 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1-180 |
| Cow position: | chr25:12700212-12700045 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr25:12939933-12940104 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr25:13785093-13784920 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr25:17555228-17555395 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr25:20632133-20631962 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr25:24656192-24656366 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr25:26900777-26900606 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr25:32448393-32448220 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr25:33837663-33837489 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr25:34344461-34344635 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr25:35626968-35627135 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-180 |
| Cow position: | chr25:41106685-41106512 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-182 |
| Cow position: | chr25:18250406-18250591 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 101 |
| Conread position: | 2-182 |
| Cow position: | chr25:16448191-16448359 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-176 |
| Cow position: | chr25:13771030-13771200 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 3-176 |
| Cow position: | chr25:35562269-35562435 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 3-177 |
| Cow position: | chr25:18489263-18489091 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 123, 36 |
| Conread position: | 3-180 |
| Cow position: | chr25:10135944-10135776 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 7, 37 |
| Conread position: | 3-180 |
| Cow position: | chr25:11664911-11664739 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 12, 37 |
| Conread position: | 3-181 |
| Cow position: | chr25:11042859-11042689 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 4-180 |
| Cow position: | chr25:26281260-26281092 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 5-176 |
| Cow position: | chr25:16923894-16924057 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 114, 25 |
| Conread position: | 5-180 |
| Cow position: | chr25:18887231-18887405 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 5-180 |
| Cow position: | chr25:26354841-26354671 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 6-180 |
| Cow position: | chr25:13959312-13959147 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 6-180 |
| Cow position: | chr25:34505578-34505746 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 9-177 |
| Cow position: | chr25:27522127-27522286 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 11-176 |
| Cow position: | chr25:34667493-34667652 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 14-180 |
| Cow position: | chr25:25509199-25509040 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 21-176 |
| Cow position: | chr25:20099861-20099711 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 101, 18 |
| Conread position: | 31-180 |
| Cow position: | chr25:28862086-28861945 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 36-163 |
| Cow position: | chr25:21146488-21146365 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 16 |
| Conread position: | 59-176 |
| Cow position: | chr25:15617218-15617101 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 59-180 |
| Cow position: | chr25:21948704-21948820 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 61-176 |
| Cow position: | chr25:14559048-14559163 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 61-177 |
| Cow position: | chr25:14962718-14962834 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 68-180 |
| Cow position: | chr25:17656837-17656725 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.