Cow genome map

Conread name: Ss1.1-Pig4-TMW8034E14.3

Conread position: 1-148
Cow position: chr28:7738691-7738550 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-158
Cow position: chr28:21894448-21894296 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-162
Cow position: chr28:5749207-5749358 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:2644215-2644045 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:5338200-5338367 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:5636326-5636168 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:7335489-7335319 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr28:8785936-8785764 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 100, 38

Conread position: 1-176
Cow position: chr28:9181371-9181202 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 1-176
Cow position: chr28:10599177-10599008 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 1-176
Cow position: chr28:15588613-15588443 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 1-176
Cow position: chr28:16596825-16596660 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:22040897-22041063 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:23674178-23674008 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 118, 42

Conread position: 1-176
Cow position: chr28:24591370-24591200 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:24885357-24885187 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:25849134-25849304 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:28470519-28470349 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:28928329-28928162 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:32588532-32588702 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr28:34582420-34582250 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr28:785166-784995 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr28:3013470-3013638 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr28:8718475-8718637 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr28:21379033-21378864 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 122, 38

Conread position: 1-177
Cow position: chr28:21568405-21568233 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 122, 38

Conread position: 1-177
Cow position: chr28:24670097-24669927 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1-177
Cow position: chr28:25026072-25025904 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 1-177
Cow position: chr28:34084022-34084187 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:1165387-1165561 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:1215334-1215505 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:1507372-1507194 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr28:1812442-1812607 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 1-180
Cow position: chr28:3189744-3189918 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:5112222-5112393 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:5210618-5210447 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:5939985-5939815 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 1-180
Cow position: chr28:6536298-6536470 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 1-180
Cow position: chr28:6958729-6958556 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 132, 43

Conread position: 1-180
Cow position: chr28:7004504-7004332 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:7743638-7743467 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:8381545-8381371 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:10302338-10302168 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:10579360-10579534 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:10616546-10616717 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:11788096-11788266 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:12407717-12407887 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:13462460-13462294 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:15033582-15033756 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:15685906-15685735 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:15918025-15918198 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:17390911-17390737 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:17664826-17664992 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:18517648-18517820 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:22230832-22231002 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:26423765-26423936 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:29037148-29037322 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:30097374-30097200 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:30534565-30534739 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:32789886-32790057 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 175, 38

Conread position: 1-180
Cow position: chr28:33254819-33254645 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr28:33639066-33638892 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr28:34596743-34596569 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-196
Cow position: chr28:483211-483401 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 2-168
Cow position: chr28:25167653-25167816 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 2-176
Cow position: chr28:7828992-7828828 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 2-180
Cow position: chr28:10643980-10644151 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 2-180
Cow position: chr28:30960114-30959940 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 128, 37

Conread position: 2-190
Cow position: chr28:34409174-34409357 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 3-174
Cow position: chr28:11954588-11954422 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr28:31849423-31849591 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 3-180
Cow position: chr28:1955866-1955694 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 143
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 3-211
Cow position: chr28:6777510-6777712 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 128
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 4-159
Cow position: chr28:10472149-10471999 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 4-177
Cow position: chr28:12152853-12152685 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 107, 35

Conread position: 9-176
Cow position: chr28:957380-957218 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 74, 21

Conread position: 11-172
Cow position: chr28:23024675-23024520 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 11-174
Cow position: chr28:25675512-25675670 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 12-180
Cow position: chr28:6061280-6061118 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 17-177
Cow position: chr28:10458742-10458895 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 18-180
Cow position: chr28:29760142-29760300 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 108, 21

Conread position: 20-180
Cow position: chr28:24488631-24488476 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 20

Conread position: 36-175
Cow position: chr28:5815840-5815708 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 44-176
Cow position: chr28:30806228-30806100 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 52-176
Cow position: chr28:10161157-10161034 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 59-180
Cow position: chr28:6231377-6231495 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 61-180
Cow position: chr28:21361943-21361829 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 71-176
Cow position: chr28:34730366-34730261 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.