Cow genome map

Conread name: Ss1.1-Pig4-TMW8034E14.3

Conread position: 1-133
Cow position: chr29:31764511-31764382 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 39

Conread position: 1-151
Cow position: chr29:9080363-9080505 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 1-153
Cow position: chr29:32542617-32542473 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-159
Cow position: chr29:40619350-40619502 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-160
Cow position: chr29:5390308-5390154 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 131
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-161
Cow position: chr29:2692917-2692765 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 122, 38

Conread position: 1-161
Cow position: chr29:32514795-32514640 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 131
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-168
Cow position: chr29:17407606-17407444 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-175
Cow position: chr29:13584685-13584520 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chr29:608161-608330 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:666940-667110 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:5960340-5960173 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr29:7428644-7428815 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 127, 38

Conread position: 1-176
Cow position: chr29:7846862-7846692 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:13850408-13850573 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 1-176
Cow position: chr29:13899133-13898963 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:13922974-13922804 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:15260522-15260692 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:15624231-15624405 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:15967086-15967256 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:16036946-16037116 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:16689300-16689132 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 1-176
Cow position: chr29:19525822-19525988 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:19890044-19889877 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:21430386-21430555 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:27977353-27977531 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 127, 38

Conread position: 1-176
Cow position: chr29:28657902-28658072 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:31095120-31095289 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:31183875-31183705 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chr29:35299387-35299223 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:39424671-39424841 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:40293803-40293633 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:40470880-40470713 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chr29:43255939-43256104 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 1-176
Cow position: chr29:45625816-45625646 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 1-177
Cow position: chr29:2102313-2102142 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr29:6219328-6219486 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr29:6873405-6873573 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr29:42806193-42806024 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chr29:45206979-45206812 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:408791-408962 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:529931-530103 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:648290-648116 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 16

Conread position: 1-180
Cow position: chr29:2415609-2415791 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 38

Conread position: 1-180
Cow position: chr29:2745986-2746157 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 1-180
Cow position: chr29:5980252-5980427 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:6263533-6263704 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:6933959-6933790 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chr29:8624725-8624896 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:9852607-9852780 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 23, 39

Conread position: 1-180
Cow position: chr29:10644944-10645115 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:10821449-10821623 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:10845423-10845252 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:13019160-13018989 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chr29:14082259-14082428 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 161, 38

Conread position: 1-180
Cow position: chr29:14209081-14209252 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:14500334-14500160 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:15995910-15996085 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 1-180
Cow position: chr29:16171641-16171813 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 1-180
Cow position: chr29:16346673-16346500 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:19620799-19620973 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:19656371-19656197 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:20253634-20253468 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:23979178-23979002 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 49, 38

Conread position: 1-180
Cow position: chr29:25930049-25930223 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:26162369-26162542 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 30, 0

Conread position: 1-180
Cow position: chr29:34739369-34739540 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:35274552-35274726 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:39077247-39077418 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chr29:45461700-45461527 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 1-181
Cow position: chr29:5785280-5785105 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 149
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 1-242
Cow position: chr29:15797297-15797528 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 2-162
Cow position: chr29:32807043-32807192 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chr29:42256508-42256677 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 142
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 37, 0

Conread position: 2-177
Cow position: chr29:131988-131822 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr29:2838870-2839043 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chr29:9640309-9640481 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 102, 15

Conread position: 3-174
Cow position: chr29:21226446-21226282 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr29:14743581-14743749 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 141
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chr29:32557280-32557448 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 3-177
Cow position: chr29:32288849-32288684 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 3-180
Cow position: chr29:4518369-4518198 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 120, 36

Conread position: 4-180
Cow position: chr29:45995-46162 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr29:2464406-2464577 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 40, 0

Conread position: 4-180
Cow position: chr29:4199862-4199700 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 4-180
Cow position: chr29:43325979-43325808 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 40, 0

Conread position: 6-174
Cow position: chr29:5340803-5340962 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 6-176
Cow position: chr29:16013820-16013986 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 127, 33

Conread position: 11-182
Cow position: chr29:32642704-32642535 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 23, 50

Conread position: 14-176
Cow position: chr29:10021871-10022028 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 133
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 0

Conread position: 14-177
Cow position: chr29:13057204-13057043 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 110, 25

Conread position: 17-177
Cow position: chr29:107512-107359 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 121, 22

Conread position: 59-180
Cow position: chr29:9330391-9330270 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 59-180
Cow position: chr29:40500598-40500717 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 61-175
Cow position: chr29:253322-253208 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 63-177
Cow position: chr29:25991634-25991748 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 63-180
Cow position: chr29:5237428-5237311 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 75-180
Cow position: chr29:35003017-35003122 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.