Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8034E14.3 |
| Conread position: | 1-119 |
| Cow position: | chr5:74035821-74035708 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-149 |
| Cow position: | chr5:28222915-28223059 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 44, 34 |
| Conread position: | 1-161 |
| Cow position: | chr5:18249347-18249192 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-162 |
| Cow position: | chr5:31120919-31121068 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-162 |
| Cow position: | chr5:34583923-34583767 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-167 |
| Cow position: | chr5:71622013-71622175 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 164, 38 |
| Conread position: | 1-174 |
| Cow position: | chr5:5105511-5105347 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-175 |
| Cow position: | chr5:18703948-18703781 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 83, 39 |
| Conread position: | 1-175 |
| Cow position: | chr5:47828036-47828199 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:3966725-3966555 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 93, 38 |
| Conread position: | 1-176 |
| Cow position: | chr5:4683510-4683680 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:4755888-4756058 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:4964086-4964251 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:5925674-5925844 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:6586174-6586341 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:10513987-10514157 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:10773970-10774140 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:11632982-11633144 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 1-176 |
| Cow position: | chr5:11922839-11923009 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:12132882-12132720 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:12730423-12730593 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:14544014-14544181 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 92, 38 |
| Conread position: | 1-176 |
| Cow position: | chr5:18120186-18120356 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:23958037-23958207 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:26076913-26077083 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:27196793-27196963 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:29031560-29031390 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:30567563-30567393 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:31708876-31708705 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 110, 38 |
| Conread position: | 1-176 |
| Cow position: | chr5:32775064-32774896 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 16, 39 |
| Conread position: | 1-176 |
| Cow position: | chr5:38661620-38661451 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:40130303-40130473 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:42507049-42506879 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:45180806-45180973 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:46666295-46666124 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 104, 43 |
| Conread position: | 1-176 |
| Cow position: | chr5:46792138-46791968 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:49118055-49118216 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:49488740-49488573 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 27, 32 |
| Conread position: | 1-176 |
| Cow position: | chr5:50605048-50605218 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:51745514-51745350 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:54928624-54928794 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:58190467-58190637 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:58198310-58198144 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:59062931-59062761 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:59145660-59145490 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr5:72739377-72739546 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-177 |
| Cow position: | chr5:14657211-14657383 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 105, 41 |
| Conread position: | 1-177 |
| Cow position: | chr5:18559116-18559281 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-177 |
| Cow position: | chr5:46649436-46649260 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 149, 38 |
| Conread position: | 1-177 |
| Cow position: | chr5:52436293-52436124 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-177 |
| Cow position: | chr5:57001790-57001619 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-177 |
| Cow position: | chr5:70532117-70532288 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-177 |
| Cow position: | chr5:73486634-73486805 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-178 |
| Cow position: | chr5:6152604-6152774 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-178 |
| Cow position: | chr5:30581625-30581454 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:1339634-1339807 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:2916716-2916544 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:3501837-3502008 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:3788514-3788340 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:7276120-7275946 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:10854529-10854701 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:10921132-10920960 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:12641153-12641328 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 137, 46 |
| Conread position: | 1-180 |
| Cow position: | chr5:18275281-18275112 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:18900266-18900095 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:21523518-21523699 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 99, 38 |
| Conread position: | 1-180 |
| Cow position: | chr5:23232589-23232413 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 162, 29 |
| Conread position: | 1-180 |
| Cow position: | chr5:23685074-23685237 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:24100939-24100764 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 1-180 |
| Cow position: | chr5:24644569-24644745 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 15, 39 |
| Conread position: | 1-180 |
| Cow position: | chr5:25929400-25929572 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:26625916-26626090 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:27550172-27550347 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:34698770-34698599 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:40791144-40790972 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 109, 42 |
| Conread position: | 1-180 |
| Cow position: | chr5:45702608-45702437 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 119, 38 |
| Conread position: | 1-180 |
| Cow position: | chr5:46003351-46003524 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:46735993-46736164 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:49521003-49520830 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:51167020-51167185 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:54462440-54462610 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:54786821-54787003 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 99, 49 |
| Conread position: | 1-180 |
| Cow position: | chr5:54858809-54858979 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:57889125-57889299 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:58244533-58244705 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:64779717-64779891 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 147 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr5:69623860-69623690 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1-181 |
| Cow position: | chr5:7141814-7141982 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-181 |
| Cow position: | chr5:18399200-18399372 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-181 |
| Cow position: | chr5:35496465-35496291 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-187 |
| Cow position: | chr5:26366870-26366688 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 147, 38 |
| Conread position: | 2-173 |
| Cow position: | chr5:34299163-34298999 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 117, 37 |
| Conread position: | 2-176 |
| Cow position: | chr5:10841106-10841272 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-176 |
| Cow position: | chr5:24219449-24219284 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 2-177 |
| Cow position: | chr5:41525258-41525426 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 8, 38 |
| Conread position: | 2-180 |
| Cow position: | chr5:40347997-40348165 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 3-161 |
| Cow position: | chr5:64959162-64959312 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 3-176 |
| Cow position: | chr5:37379391-37379225 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 3-177 |
| Cow position: | chr5:34191220-34191054 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 37 |
| Conread position: | 3-180 |
| Cow position: | chr5:23667866-23668038 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 3-180 |
| Cow position: | chr5:28015350-28015182 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 3-180 |
| Cow position: | chr5:49222210-49222383 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 3-181 |
| Cow position: | chr5:444809-444636 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 4-177 |
| Cow position: | chr5:37734636-37734469 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 55 |
| Conread position: | 4-180 |
| Cow position: | chr5:47342007-47341837 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 5-160 |
| Cow position: | chr5:7756572-7756421 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 29, 36 |
| Conread position: | 5-168 |
| Cow position: | chr5:42043198-42043042 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 40 |
| Conread position: | 5-180 |
| Cow position: | chr5:4387507-4387343 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 6-176 |
| Cow position: | chr5:73443699-73443537 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 6-180 |
| Cow position: | chr5:37423435-37423266 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 20, 34 |
| Conread position: | 6-180 |
| Cow position: | chr5:44710098-44710267 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 7-181 |
| Cow position: | chr5:55993159-55993324 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 8-180 |
| Cow position: | chr5:34219221-34219393 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 119, 27 |
| Conread position: | 9-177 |
| Cow position: | chr5:24152914-24152757 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 133, 30 |
| Conread position: | 15-176 |
| Cow position: | chr5:4016815-4016967 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 15-179 |
| Cow position: | chr5:47358993-47358836 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 162, 24 |
| Conread position: | 19-176 |
| Cow position: | chr5:48226299-48226453 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 18, 36 |
| Conread position: | 20-177 |
| Cow position: | chr5:27063098-27063251 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 23-176 |
| Cow position: | chr5:25902195-25902343 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 30-174 |
| Cow position: | chr5:41066440-41066301 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 31-176 |
| Cow position: | chr5:9056925-9056780 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 34-176 |
| Cow position: | chr5:23846861-23846999 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 37-176 |
| Cow position: | chr5:13407851-13407716 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 59-163 |
| Cow position: | chr5:27654985-27654883 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 59-176 |
| Cow position: | chr5:56541277-56541394 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 59-179 |
| Cow position: | chr5:50390870-50390990 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 60-171 |
| Cow position: | chr5:32953320-32953213 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 60-180 |
| Cow position: | chr5:27490181-27490066 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 62-177 |
| Cow position: | chr5:23830083-23830201 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 64-180 |
| Cow position: | chr5:26095586-26095473 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 66-180 |
| Cow position: | chr5:280421-280307 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 68-177 |
| Cow position: | chr5:18884336-18884445 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 77-180 |
| Cow position: | chr5:47470007-47469904 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.