Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8034E14.3 |
| Conread position: | 1-119 |
| Cow position: | chr6:14502255-14502140 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-128 |
| Cow position: | chr6:25375666-25375788 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-142 |
| Cow position: | chr6:39349818-39349682 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-146 |
| Cow position: | chr6:28400819-28400959 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-149 |
| Cow position: | chr6:24625161-24625304 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-157 |
| Cow position: | chr6:28702281-28702431 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-158 |
| Cow position: | chr6:15278127-15278279 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-160 |
| Cow position: | chr6:50720541-50720387 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-162 |
| Cow position: | chr6:1508076-1508232 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-162 |
| Cow position: | chr6:3573210-3573055 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-162 |
| Cow position: | chr6:58029570-58029418 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-162 |
| Cow position: | chr6:68029602-68029449 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-169 |
| Cow position: | chr6:43620157-43619994 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-174 |
| Cow position: | chr6:2377129-2376967 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-174 |
| Cow position: | chr6:28064423-28064255 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-174 |
| Cow position: | chr6:50112528-50112363 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-174 |
| Cow position: | chr6:62577757-62577924 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-175 |
| Cow position: | chr6:21833221-21833390 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-175 |
| Cow position: | chr6:42266161-42265997 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:328934-329100 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:1408222-1408391 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:1796238-1796408 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:2557076-2556903 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 1-176 |
| Cow position: | chr6:3151656-3151489 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:3757161-3756994 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:6094663-6094494 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:7138906-7139076 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:10043644-10043474 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:11019086-11018917 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:12663888-12664058 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:13308956-13309126 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:13849502-13849333 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:13979188-13979019 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:14927886-14927719 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:16050863-16051033 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 145 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:16982370-16982540 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:18513980-18513813 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:19104484-19104652 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:20351664-20351834 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:28186408-28186578 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:28489140-28489310 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:31586835-31587005 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:32001853-32002021 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 130, 38 |
| Conread position: | 1-176 |
| Cow position: | chr6:33465391-33465229 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:33810065-33809895 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:34128885-34128718 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:37387007-37386840 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:37478648-37478481 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:39911753-39911583 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:44148125-44148295 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:45902460-45902630 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:45936690-45936523 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:51149366-51149197 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:53544526-53544356 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 146 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:55238120-55237950 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:60378588-60378418 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:61052669-61052839 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-176 |
| Cow position: | chr6:62664201-62664038 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 157, 38 |
| Conread position: | 1-176 |
| Cow position: | chr6:67552910-67552740 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-177 |
| Cow position: | chr6:6184537-6184707 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-177 |
| Cow position: | chr6:6186670-6186500 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-177 |
| Cow position: | chr6:11164094-11164265 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 32, 44 |
| Conread position: | 1-177 |
| Cow position: | chr6:24241716-24241546 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-177 |
| Cow position: | chr6:66234226-66234057 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 132, 38 |
| Conread position: | 1-180 |
| Cow position: | chr6:49147-49319 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:183117-183286 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:477969-477798 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:704643-704468 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 29, 39 |
| Conread position: | 1-180 |
| Cow position: | chr6:916470-916296 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:1820201-1820369 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:3485969-3486143 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:5750357-5750186 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:5947351-5947528 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 124, 38 |
| Conread position: | 1-180 |
| Cow position: | chr6:8536875-8537049 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:11722769-11722943 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:14133317-14133491 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:14143063-14143237 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:15138741-15138914 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:16592398-16592227 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:16767409-16767584 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 23, 57 |
| Conread position: | 1-180 |
| Cow position: | chr6:17048734-17048563 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:18913049-18913223 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:19018531-19018363 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:20557524-20557691 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:21975088-21974917 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:25216728-25216557 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:25791273-25791444 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:27474844-27474673 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:28171332-28171161 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:29479411-29479242 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:30272462-30272636 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:34492582-34492408 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:34505617-34505790 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:35874284-35874457 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:38273997-38273834 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:38874233-38874404 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:39332103-39332274 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:39435494-39435668 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:40864604-40864774 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:40974613-40974439 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:41229870-41229699 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:43777684-43777515 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:44018402-44018574 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:47040760-47040934 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:50486369-50486543 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:51091789-51091615 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:51716971-51716797 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:51732507-51732336 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:53971258-53971088 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:55539844-55540018 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:59595681-59595510 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:64718748-64718574 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:65844048-65843866 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 89, 38 |
| Conread position: | 1-180 |
| Cow position: | chr6:65906361-65906534 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-180 |
| Cow position: | chr6:65929670-65929494 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 103, 57 |
| Conread position: | 1-180 |
| Cow position: | chr6:66547887-66547712 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-189 |
| Cow position: | chr6:36530712-36530535 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-196 |
| Cow position: | chr6:2580845-2580659 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-158 |
| Cow position: | chr6:33950735-33950887 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 8, 38 |
| Conread position: | 2-176 |
| Cow position: | chr6:17595861-17596030 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-176 |
| Cow position: | chr6:40277499-40277330 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-176 |
| Cow position: | chr6:46296697-46296530 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-177 |
| Cow position: | chr6:1275569-1275738 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-177 |
| Cow position: | chr6:41676364-41676193 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 81, 42 |
| Conread position: | 2-180 |
| Cow position: | chr6:237431-237597 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-180 |
| Cow position: | chr6:3887082-3887255 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 2-180 |
| Cow position: | chr6:10611264-10611094 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 2-184 |
| Cow position: | chr6:12628347-12628173 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 8, 57 |
| Conread position: | 3-176 |
| Cow position: | chr6:3685314-3685150 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 3-176 |
| Cow position: | chr6:11870504-11870672 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 144 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 3-176 |
| Cow position: | chr6:15925140-15925304 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 3-176 |
| Cow position: | chr6:32677533-32677702 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 3-177 |
| Cow position: | chr6:1106808-1106971 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 3-180 |
| Cow position: | chr6:27152017-27152189 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 3-181 |
| Cow position: | chr6:6080414-6080582 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 4-180 |
| Cow position: | chr6:27527564-27527736 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 123, 35 |
| Conread position: | 4-180 |
| Cow position: | chr6:50570623-50570459 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 5-177 |
| Cow position: | chr6:10646106-10645944 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 142, 34 |
| Conread position: | 5-180 |
| Cow position: | chr6:1536129-1535954 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 120, 34 |
| Conread position: | 6-176 |
| Cow position: | chr6:43574913-43574752 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 6-180 |
| Cow position: | chr6:40552159-40552322 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 7-180 |
| Cow position: | chr6:8204598-8204433 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 21-177 |
| Cow position: | chr6:43791174-43791324 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 22-162 |
| Cow position: | chr6:26776763-26776901 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 67, 17 |
| Conread position: | 22-180 |
| Cow position: | chr6:15895389-15895538 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 22-180 |
| Cow position: | chr6:57472220-57472067 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 30-180 |
| Cow position: | chr6:63705244-63705390 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 36-176 |
| Cow position: | chr6:13758117-13757981 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 36-177 |
| Cow position: | chr6:40000095-40000228 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 48-180 |
| Cow position: | chr6:15178051-15177922 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 59-176 |
| Cow position: | chr6:31010413-31010530 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 59-177 |
| Cow position: | chr6:8758903-8759021 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 59-180 |
| Cow position: | chr6:43800860-43800979 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 61-180 |
| Cow position: | chr6:22931547-22931666 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 63-177 |
| Cow position: | chr6:58603854-58603741 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 75-176 |
| Cow position: | chr6:46479488-46479387 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 103-497 |
| Cow position: | chr6:38672002-38671621 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 87 |
| Conread position: | 508-863 |
| Cow position: | chr6:38671567-38671205 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 58 |
Show alignments to all cow chromosomes.