Cow genome map

Conread name: Ss1.1-Pig4-TMW8034E14.3

Conread position: 1-145
Cow position: chrX:2560682-2560821 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-146
Cow position: chrX:43437641-43437780 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-148
Cow position: chrX:36691183-36691326 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 1-152
Cow position: chrX:29171518-29171660 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-157
Cow position: chrX:1941095-1941246 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-157
Cow position: chrX:30013258-30013109 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 118, 38

Conread position: 1-161
Cow position: chrX:41153058-41152901 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 38

Conread position: 1-162
Cow position: chrX:29759187-29759342 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-171
Cow position: chrX:20185488-20185322 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 16

Conread position: 1-172
Cow position: chrX:3082870-3083036 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chrX:6870817-6870985 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chrX:26274224-26274063 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-174
Cow position: chrX:31494999-31494830 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 150, 38

Conread position: 1-174
Cow position: chrX:42008895-42008732 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-175
Cow position: chrX:672939-673106 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 123, 43

Conread position: 1-175
Cow position: chrX:3418955-3419123 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-175
Cow position: chrX:45375768-45375937 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:2047354-2047187 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:2273566-2273406 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:2486919-2486749 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:2578689-2578519 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:3360093-3359924 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:5281516-5281686 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:5321449-5321619 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:5333165-5333335 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:5360272-5360105 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:5865404-5865235 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:6247915-6248079 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chrX:6580207-6580037 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:7095762-7095595 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:7754169-7753999 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:8961559-8961724 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:9127348-9127178 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:10529524-10529691 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chrX:10867588-10867753 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:11462730-11462900 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:12345201-12345034 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:12359153-12358983 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:12652228-12652395 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chrX:13072183-13072352 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:13092743-13092912 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:13416157-13416335 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 28

Conread position: 1-176
Cow position: chrX:14461581-14461411 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:14597119-14596952 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chrX:15177171-15177336 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:15261354-15261516 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 1-176
Cow position: chrX:15978689-15978859 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:16360844-16361010 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:16464460-16464291 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:17053823-17053657 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chrX:17476143-17476313 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:17890809-17890639 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:18657538-18657708 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:19398039-19397870 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:19474885-19475058 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 145
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 163, 38

Conread position: 1-176
Cow position: chrX:20034143-20034309 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:20357737-20357907 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:20741364-20741534 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:21766895-21766725 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:22565422-22565592 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:22616918-22617088 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:23133864-23133702 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:24730913-24730743 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:26443813-26443645 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 132, 29

Conread position: 1-176
Cow position: chrX:27424020-27424190 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:27591754-27591921 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:28587244-28587075 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:28754074-28754244 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:29095052-29095222 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:29909162-29909329 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chrX:29911597-29911431 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:30167812-30167979 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:30437170-30437000 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:31979587-31979753 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:32064899-32065069 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:34093564-34093734 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:35532122-35531955 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:35938757-35938931 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 63

Conread position: 1-176
Cow position: chrX:36536467-36536633 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:37851408-37851239 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-176
Cow position: chrX:39561669-39561838 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 1-176
Cow position: chrX:39712816-39712649 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chrX:2814214-2814385 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chrX:3143101-3142931 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 1-177
Cow position: chrX:5295288-5295461 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 151, 38

Conread position: 1-177
Cow position: chrX:12312715-12312887 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chrX:15040280-15040451 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chrX:16023028-16022857 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 1-177
Cow position: chrX:20651708-20651539 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 40

Conread position: 1-177
Cow position: chrX:20725236-20725065 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chrX:23573538-23573709 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chrX:30059444-30059276 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1-177
Cow position: chrX:45417336-45417508 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 109, 38

Conread position: 1-180
Cow position: chrX:731292-731466 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:1549244-1549072 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 39

Conread position: 1-180
Cow position: chrX:2480365-2480537 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 1-180
Cow position: chrX:4906728-4906902 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:6280532-6280708 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 61, 39

Conread position: 1-180
Cow position: chrX:7552543-7552717 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chrX:9094909-9094738 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:12464271-12464096 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 84, 38

Conread position: 1-180
Cow position: chrX:13080487-13080659 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 1-180
Cow position: chrX:13407021-13407190 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 1-180
Cow position: chrX:16045234-16045067 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:16701947-16701773 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chrX:16710229-16710055 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 42, 0

Conread position: 1-180
Cow position: chrX:16781548-16781378 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 122, 38

Conread position: 1-180
Cow position: chrX:16804876-16805050 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:16809621-16809795 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:21225743-21225569 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:21388846-21388675 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 1-180
Cow position: chrX:21413861-21413690 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 1-180
Cow position: chrX:21492432-21492257 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 16, 39

Conread position: 1-180
Cow position: chrX:21591552-21591381 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:21751395-21751569 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:21831778-21831604 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:22810158-22809987 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:23021580-23021406 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chrX:23394871-23394697 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:24110306-24110480 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 20

Conread position: 1-180
Cow position: chrX:26756377-26756551 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:27978554-27978725 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:28625363-28625532 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 1-180
Cow position: chrX:30181662-30181836 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:30229848-30230018 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 1-180
Cow position: chrX:31200822-31200653 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 1-180
Cow position: chrX:36838983-36838808 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 124, 38

Conread position: 1-180
Cow position: chrX:37814413-37814239 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 1-180
Cow position: chrX:38149862-38149687 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 57, 0

Conread position: 1-180
Cow position: chrX:39697033-39696862 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 1-180
Cow position: chrX:43074009-43073839 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 1-180
Cow position: chrX:48856239-48856413 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 162, 27

Conread position: 1-181
Cow position: chrX:23279290-23279118 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-181
Cow position: chrX:23388284-23388459 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 1-181
Cow position: chrX:23453789-23453963 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 146
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 1-181
Cow position: chrX:41886735-41886908 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 2-157
Cow position: chrX:11147077-11147224 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 2-162
Cow position: chrX:16036171-16036325 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chrX:2500912-2500743 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chrX:8481717-8481548 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chrX:13929468-13929637 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 2-176
Cow position: chrX:18221681-18221512 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 2-176
Cow position: chrX:21342673-21342507 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 2-177
Cow position: chrX:22818338-22818170 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chrX:5366733-5366903 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 151, 37

Conread position: 2-180
Cow position: chrX:26623547-26623718 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 2-180
Cow position: chrX:32328476-32328303 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 59

Conread position: 3-173
Cow position: chrX:13180291-13180460 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 36

Conread position: 3-174
Cow position: chrX:24770594-24770755 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chrX:3427397-3427231 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 3-176
Cow position: chrX:7119753-7119585 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 141
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chrX:9010597-9010432 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chrX:24445947-24446115 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 141
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chrX:24468859-24469024 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 3-176
Cow position: chrX:28520338-28520503 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chrX:5852858-5853034 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 44

Conread position: 3-180
Cow position: chrX:17665535-17665707 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 3-180
Cow position: chrX:26769449-26769620 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 3-181
Cow position: chrX:24412289-24412120 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 4-180
Cow position: chrX:22126508-22126676 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 5-180
Cow position: chrX:5247653-5247485 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 35

Conread position: 6-168
Cow position: chrX:22590580-22590740 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 34

Conread position: 7-176
Cow position: chrX:2381759-2381595 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 7-176
Cow position: chrX:28505003-28505167 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 137
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 32, 0

Conread position: 8-163
Cow position: chrX:21000459-21000311 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 8-175
Cow position: chrX:31511869-31511702 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 31

Conread position: 8-176
Cow position: chrX:11458544-11458708 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 111, 31

Conread position: 9-176
Cow position: chrX:14783222-14783381 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 15-176
Cow position: chrX:6236577-6236730 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 17-174
Cow position: chrX:26397871-26398023 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 17-177
Cow position: chrX:30137608-30137762 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 17-180
Cow position: chrX:503786-503944 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 20-176
Cow position: chrX:3373674-3373825 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 128
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 19, 0

Conread position: 20-176
Cow position: chrX:28559627-28559778 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 21-176
Cow position: chrX:15622247-15622397 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 21-180
Cow position: chrX:38124641-38124489 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 33-180
Cow position: chrX:6373790-6373645 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 93, 23

Conread position: 33-180
Cow position: chrX:18246372-18246225 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 36-176
Cow position: chrX:9170144-9170278 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 36-176
Cow position: chrX:24323162-24323298 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 44-180
Cow position: chrX:27497105-27496976 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 48-176
Cow position: chrX:39565098-39565225 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 57-176
Cow position: chrX:3466428-3466547 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 59-162
Cow position: chrX:30135886-30135787 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 59-176
Cow position: chrX:21267858-21267974 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 61-180
Cow position: chrX:18951507-18951623 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 61-180
Cow position: chrX:20133939-20134057 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 64-174
Cow position: chrX:20799507-20799397 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 69, 49

Show alignments to all cow chromosomes.