Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8038N08.5
        

               Conread position:
               44-321
               

               Cow position:
               chr11:12291345-12291061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 139
               

               Conread position:
               354-751
               

               Cow position:
               chr11:12290928-12290569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 81
               

               Conread position:
               479-741
               

               Cow position:
               chr11:36793563-36793818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               144, 21
               

               Conread position:
               483-743
               

               Cow position:
               chr11:48926890-48926640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               105, 28
               

               Conread position:
               490-752
               

               Cow position:
               chr11:18163358-18163095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               102, 176
               

               Conread position:
               492-742
               

               Cow position:
               chr11:39828023-39828268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               46, 144
               

               Conread position:
               494-702
               

               Cow position:
               chr11:72096618-72096414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               56, 98
               

               Conread position:
               504-725
               

               Cow position:
               chr11:38808679-38808901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               86, 176
               

               Conread position:
               518-741
               

               Cow position:
               chr11:62619851-62620068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 22
               

               Conread position:
               798-974
               

               Cow position:
               chr11:12290572-12290389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 20
               
Show alignments to all cow chromosomes.