Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8038N08.5
        

               Conread position:
               484-747
               

               Cow position:
               chr16:53388924-53388669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               130, 9
               

               Conread position:
               490-738
               

               Cow position:
               chr16:24126015-24126252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               124, 131
               

               Conread position:
               490-742
               

               Cow position:
               chr16:23212921-23212671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               100, 173
               

               Conread position:
               506-742
               

               Cow position:
               chr16:9626047-9625810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               77, 154
               

               Conread position:
               507-742
               

               Cow position:
               chr16:20922437-20922200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               83, 168
               

               Conread position:
               565-743
               

               Cow position:
               chr16:11196893-11196717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 102
               

               Conread position:
               798-980
               

               Cow position:
               chr16:53388667-53388468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               47, 25
               
Show alignments to all cow chromosomes.