Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039E19.5 |
| Conread position: | 175-374 |
| Cow position: | chr11:41461660-41461449 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 178-545 |
| Cow position: | chr11:56334108-56333752 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 107, 57 |
| Conread position: | 178-556 |
| Cow position: | chr11:45805761-45805375 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 269 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 125, 212 |
| Conread position: | 182-559 |
| Cow position: | chr11:71353879-71353488 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 275 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 189-464 |
| Cow position: | chr11:20230127-20230409 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 80, 17 |
| Conread position: | 191-556 |
| Cow position: | chr11:52942527-52942155 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 36 |
| Conread position: | 191-561 |
| Cow position: | chr11:20714411-20714048 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 26 |
| Conread position: | 217-564 |
| Cow position: | chr11:24938844-24939217 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 256 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 72, 139 |
| Conread position: | 222-556 |
| Cow position: | chr11:35223007-35223359 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 78, 46 |
| Conread position: | 226-517 |
| Cow position: | chr11:39201350-39201651 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 198 |
| Conread position: | 261-525 |
| Cow position: | chr11:457864-457583 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 39, 11 |
| Conread position: | 262-440 |
| Cow position: | chr11:8860598-8860420 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 42, 67 |
| Conread position: | 278-564 |
| Cow position: | chr11:58770651-58770340 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 26, 158 |
| Conread position: | 310-562 |
| Cow position: | chr11:59060125-59059854 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 559-778 |
| Cow position: | chr11:38714925-38714716 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 560-787 |
| Cow position: | chr11:46108841-46108614 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 22, 30 |
| Conread position: | 560-813 |
| Cow position: | chr11:37296173-37296425 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 159, 51 |
| Conread position: | 560-817 |
| Cow position: | chr11:54468055-54467802 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 159, 11 |
| Conread position: | 563-785 |
| Cow position: | chr11:75060719-75060939 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 52, 40 |
| Conread position: | 575-817 |
| Cow position: | chr11:41022546-41022777 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 588-813 |
| Cow position: | chr11:18185345-18185121 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 591-826 |
| Cow position: | chr11:44170222-44170449 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 126, 60 |
| Conread position: | 630-818 |
| Cow position: | chr11:10449808-10449996 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 89, 99 |
| Conread position: | 641-834 |
| Cow position: | chr11:43992988-43993182 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 166, 29 |
Show alignments to all cow chromosomes.