Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039E19.5 |
| Conread position: | 175-375 |
| Cow position: | chr16:4897334-4897535 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 128, 14 |
| Conread position: | 175-562 |
| Cow position: | chr16:14749244-14748869 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 271 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 150, 35 |
| Conread position: | 183-563 |
| Cow position: | chr16:47851801-47852200 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 24 |
| Conread position: | 189-562 |
| Cow position: | chr16:10449237-10449628 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 75 |
| Conread position: | 194-469 |
| Cow position: | chr16:42131890-42131608 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 141, 204 |
| Conread position: | 216-532 |
| Cow position: | chr16:49026091-49026413 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 228 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 117, 88 |
| Conread position: | 216-566 |
| Cow position: | chr16:32791500-32791859 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 181 |
| Conread position: | 228-566 |
| Cow position: | chr16:13828701-13829035 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 248, 107 |
| Conread position: | 272-550 |
| Cow position: | chr16:28161097-28161391 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 30, 115 |
| Conread position: | 300-559 |
| Cow position: | chr16:44404869-44405147 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 56, 250 |
| Conread position: | 300-559 |
| Cow position: | chr16:44456447-44456722 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 56, 247 |
| Conread position: | 390-556 |
| Cow position: | chr16:53091233-53091416 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 557-817 |
| Cow position: | chr16:25123334-25123599 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 48, 95 |
| Conread position: | 560-808 |
| Cow position: | chr16:9484993-9485235 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 144, 42 |
| Conread position: | 560-816 |
| Cow position: | chr16:19280485-19280740 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 48, 55 |
| Conread position: | 560-817 |
| Cow position: | chr16:13725154-13725405 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 562-812 |
| Cow position: | chr16:9167145-9167393 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 157, 43 |
| Conread position: | 562-813 |
| Cow position: | chr16:14383421-14383672 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 33, 44 |
| Conread position: | 563-826 |
| Cow position: | chr16:1705982-1705722 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 155, 40 |
| Conread position: | 565-817 |
| Cow position: | chr16:33913598-33913356 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.