Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039E19.5
        

               Conread position:
               85-817
               

               Cow position:
               chr22:38129200-38128453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               758
               

               Alignm identity:
               574
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 78
               

               Conread position:
               228-440
               

               Cow position:
               chr22:17782853-17783075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               73, 185
               

               Conread position:
               554-813
               

               Cow position:
               chr22:19128314-19128064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               69, 49
               

               Conread position:
               559-813
               

               Cow position:
               chr22:47508940-47509200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 225
               

               Conread position:
               560-808
               

               Cow position:
               chr22:20948931-20949169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               22, 15
               

               Conread position:
               560-811
               

               Cow position:
               chr22:19464450-19464199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               61, 109
               

               Conread position:
               560-813
               

               Cow position:
               chr22:43351413-43351666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               41, 45
               

               Conread position:
               560-817
               

               Cow position:
               chr22:38364435-38364179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               103, 43
               

               Conread position:
               563-826
               

               Cow position:
               chr22:11682129-11681860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               24, 48
               

               Conread position:
               610-817
               

               Cow position:
               chr22:16280185-16280392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               78, 12
               
Show alignments to all cow chromosomes.