Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039E19.5 |
| Conread position: | 175-400 |
| Cow position: | chr4:45906132-45906365 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 129, 45 |
| Conread position: | 175-480 |
| Cow position: | chr4:3925519-3925850 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 126, 190 |
| Conread position: | 178-368 |
| Cow position: | chr4:41093202-41093002 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 178-419 |
| Cow position: | chr4:21037989-21038234 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 147, 29 |
| Conread position: | 178-562 |
| Cow position: | chr4:50207913-50207531 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 181 |
| Conread position: | 184-563 |
| Cow position: | chr4:47715910-47715544 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 20 |
| Conread position: | 189-565 |
| Cow position: | chr4:40669800-40670195 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 277 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 114, 167 |
| Conread position: | 190-562 |
| Cow position: | chr4:40411513-40411135 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 111, 144 |
| Conread position: | 194-555 |
| Cow position: | chr4:48994627-48994994 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 54, 18 |
| Conread position: | 220-512 |
| Cow position: | chr4:43889489-43889184 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 81, 98 |
| Conread position: | 228-559 |
| Cow position: | chr4:29264363-29264000 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 75, 192 |
| Conread position: | 228-563 |
| Cow position: | chr4:39519440-39519090 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 76, 9 |
| Conread position: | 273-575 |
| Cow position: | chr4:42559205-42558883 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 8, 105 |
| Conread position: | 559-816 |
| Cow position: | chr4:841634-841387 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 160, 46 |
| Conread position: | 560-817 |
| Cow position: | chr4:20072134-20072398 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 562-812 |
| Cow position: | chr4:52222038-52222283 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 155, 43 |
| Conread position: | 564-796 |
| Cow position: | chr4:47338998-47338764 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 113, 46 |
| Conread position: | 564-827 |
| Cow position: | chr4:38522683-38522423 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 49 |
| Conread position: | 573-828 |
| Cow position: | chr4:36346408-36346155 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 144, 78 |
| Conread position: | 605-826 |
| Cow position: | chr4:38468213-38468438 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 93, 8 |
| Conread position: | 606-824 |
| Cow position: | chr4:32981666-32981885 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 90, 107 |
| Conread position: | 607-811 |
| Cow position: | chr4:34632502-34632707 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 110, 16 |
| Conread position: | 613-813 |
| Cow position: | chr4:55310051-55309853 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 105, 10 |
Show alignments to all cow chromosomes.