Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039E19.5 |
| Conread position: | 175-480 |
| Cow position: | chr6:34836450-34836754 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 229 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 30, 12 |
| Conread position: | 175-556 |
| Cow position: | chr6:36269696-36270084 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 12 |
| Conread position: | 175-562 |
| Cow position: | chr6:17451752-17452148 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 279 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 31, 40 |
| Conread position: | 178-416 |
| Cow position: | chr6:39796438-39796189 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 178-450 |
| Cow position: | chr6:26375754-26376037 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 66, 231 |
| Conread position: | 189-547 |
| Cow position: | chr6:33798741-33798375 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 161 |
| Conread position: | 194-559 |
| Cow position: | chr6:854295-854676 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 172 |
| Conread position: | 210-413 |
| Cow position: | chr6:55266520-55266734 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 127 |
| Conread position: | 216-562 |
| Cow position: | chr6:50464547-50464189 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 257 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 87, 122 |
| Conread position: | 228-556 |
| Cow position: | chr6:6354299-6353950 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 254 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 75, 11 |
| Conread position: | 389-556 |
| Cow position: | chr6:2164994-2165171 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 560-809 |
| Cow position: | chr6:22809960-22809712 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 159, 53 |
| Conread position: | 560-810 |
| Cow position: | chr6:24272774-24272522 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 560-817 |
| Cow position: | chr6:20603245-20602989 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 108, 50 |
| Conread position: | 561-759 |
| Cow position: | chr6:1629460-1629256 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 23 |
| Conread position: | 562-816 |
| Cow position: | chr6:51337901-51338152 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 27, 44 |
| Conread position: | 562-817 |
| Cow position: | chr6:18350987-18350736 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 158, 43 |
| Conread position: | 614-816 |
| Cow position: | chr6:4652610-4652401 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.