Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039E19.5 |
| Conread position: | 175-358 |
| Cow position: | chr7:50459430-50459235 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 175-553 |
| Cow position: | chr7:42090387-42090756 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 153, 17 |
| Conread position: | 175-556 |
| Cow position: | chr7:59088148-59087746 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 178-480 |
| Cow position: | chr7:183085-183404 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 31, 205 |
| Conread position: | 178-559 |
| Cow position: | chr7:46493723-46493330 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 21 |
| Conread position: | 179-567 |
| Cow position: | chr7:61548693-61549101 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 38 |
| Conread position: | 182-534 |
| Cow position: | chr7:4910387-4910011 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 112 |
| Conread position: | 199-547 |
| Cow position: | chr7:65625877-65626227 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 249 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 54, 69 |
| Conread position: | 380-576 |
| Cow position: | chr7:35010546-35010340 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 202 |
| Conread position: | 554-817 |
| Cow position: | chr7:60457430-60457690 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 561-813 |
| Cow position: | chr7:21652159-21652410 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 128, 43 |
| Conread position: | 562-756 |
| Cow position: | chr7:3780718-3780907 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 152, 43 |
| Conread position: | 565-823 |
| Cow position: | chr7:35504258-35504526 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 61, 107 |
| Conread position: | 568-817 |
| Cow position: | chr7:642743-642494 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 118, 25 |
| Conread position: | 568-817 |
| Cow position: | chr7:8831313-8831558 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 151, 37 |
| Conread position: | 573-817 |
| Cow position: | chr7:53428556-53428798 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 146, 15 |
| Conread position: | 575-817 |
| Cow position: | chr7:50686143-50685902 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 112, 39 |
| Conread position: | 599-795 |
| Cow position: | chr7:4914828-4915024 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 136, 60 |
| Conread position: | 614-817 |
| Cow position: | chr7:20157357-20157558 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 102, 0 |
Show alignments to all cow chromosomes.