Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039E19.5 |
| Conread position: | 175-531 |
| Cow position: | chr9:58494144-58493777 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 249 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 29, 42 |
| Conread position: | 178-450 |
| Cow position: | chr9:17011496-17011226 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 123, 197 |
| Conread position: | 178-531 |
| Cow position: | chr9:58587457-58587832 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 126, 215 |
| Conread position: | 178-553 |
| Cow position: | chr9:3475970-3475578 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 126, 104 |
| Conread position: | 178-556 |
| Cow position: | chr9:17557896-17558289 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 96 |
| Conread position: | 178-562 |
| Cow position: | chr9:44342355-44341950 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 184-554 |
| Cow position: | chr9:21644410-21644026 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 179 |
| Conread position: | 223-517 |
| Cow position: | chr9:41246547-41246837 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 78, 116 |
| Conread position: | 325-567 |
| Cow position: | chr9:36851960-36852210 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 111, 18 |
| Conread position: | 556-790 |
| Cow position: | chr9:52462892-52462662 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 5, 57 |
| Conread position: | 557-817 |
| Cow position: | chr9:30724492-30724237 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 162, 7 |
| Conread position: | 560-755 |
| Cow position: | chr9:42966157-42965964 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 561-817 |
| Cow position: | chr9:22836047-22835795 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 54, 42 |
| Conread position: | 563-816 |
| Cow position: | chr9:36351974-36351722 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 155, 50 |
| Conread position: | 574-813 |
| Cow position: | chr9:44851992-44852222 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 122, 31 |
| Conread position: | 584-816 |
| Cow position: | chr9:32503610-32503844 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 36, 73 |
Show alignments to all cow chromosomes.