Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8043O22.5
        

               Conread position:
               350-580
               

               Cow position:
               chr10:11821180-11820951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               74, 13
               

               Conread position:
               350-804
               

               Cow position:
               chr10:6259993-6260450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 14
               

               Conread position:
               350-804
               

               Cow position:
               chr10:24977346-24977793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 14
               

               Conread position:
               365-804
               

               Cow position:
               chr10:64302357-64302794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 131
               

               Conread position:
               401-562
               

               Cow position:
               chr10:39879992-39880153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               34, 16
               

               Conread position:
               424-688
               

               Cow position:
               chr10:28115754-28116013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 20
               

               Conread position:
               463-697
               

               Cow position:
               chr10:64288381-64288603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               12, 110
               

               Conread position:
               545-725
               

               Cow position:
               chr10:21076983-21076812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               588-804
               

               Cow position:
               chr10:11820907-11820680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               18, 161
               

               Conread position:
               622-804
               

               Cow position:
               chr10:39880518-39880697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               164, 49
               
Show alignments to all cow chromosomes.