Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8048C15.3 |
| Conread position: | 300-658 |
| Cow position: | chr10:2893540-2893901 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 303-670 |
| Cow position: | chr10:17132189-17132587 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 275 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 307-488 |
| Cow position: | chr10:31740849-31741034 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 125, 165 |
| Conread position: | 312-579 |
| Cow position: | chr10:39212906-39213176 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 95, 87 |
| Conread position: | 312-668 |
| Cow position: | chr10:12159075-12158690 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 267 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 106, 122 |
| Conread position: | 312-670 |
| Cow position: | chr10:49370122-49369753 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 120, 18 |
| Conread position: | 315-670 |
| Cow position: | chr10:62721409-62721046 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 117, 28 |
| Conread position: | 324-489 |
| Cow position: | chr10:8839072-8839235 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 108, 30 |
| Conread position: | 324-489 |
| Cow position: | chr10:59407636-59407799 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 108, 41 |
| Conread position: | 324-601 |
| Cow position: | chr10:60130117-60130410 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 52, 129 |
| Conread position: | 324-646 |
| Cow position: | chr10:54826204-54825867 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 108, 131 |
| Conread position: | 324-661 |
| Cow position: | chr10:52609597-52609952 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 47 |
| Conread position: | 324-661 |
| Cow position: | chr10:56604291-56604618 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 164, 12 |
| Conread position: | 324-666 |
| Cow position: | chr10:30101556-30101210 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 20, 131 |
| Conread position: | 324-666 |
| Cow position: | chr10:48028218-48028574 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 105, 40 |
| Conread position: | 324-673 |
| Cow position: | chr10:5741964-5742339 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 106, 94 |
| Conread position: | 324-673 |
| Cow position: | chr10:9067878-9068242 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 150, 90 |
| Conread position: | 324-674 |
| Cow position: | chr10:25578869-25578512 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 175, 30 |
| Conread position: | 324-676 |
| Cow position: | chr10:6473339-6473691 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 106, 121 |
| Conread position: | 325-657 |
| Cow position: | chr10:38832581-38832940 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 251 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 164, 122 |
| Conread position: | 325-669 |
| Cow position: | chr10:65689191-65689569 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 57, 109 |
| Conread position: | 327-498 |
| Cow position: | chr10:8729141-8729309 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 105, 118 |
| Conread position: | 327-666 |
| Cow position: | chr10:55581689-55581332 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 103, 118 |
| Conread position: | 330-675 |
| Cow position: | chr10:12670885-12671230 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 82, 28 |
| Conread position: | 331-657 |
| Cow position: | chr10:55225615-55225944 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 101, 33 |
| Conread position: | 337-675 |
| Cow position: | chr10:52567536-52567183 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 95, 116 |
| Conread position: | 351-674 |
| Cow position: | chr10:39455132-39455444 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 75, 66 |
| Conread position: | 399-668 |
| Cow position: | chr10:17631446-17631714 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 57 |
| Conread position: | 510-675 |
| Cow position: | chr10:42501869-42501703 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 140 |
| Conread position: | 511-670 |
| Cow position: | chr10:24863945-24863770 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
Show alignments to all cow chromosomes.