Cow genome map

Conread name: Ss1.1-Pig4-TMW8048C15.3

Conread position: 302-659
Cow position: chr11:74172524-74172876 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 234
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 198, 59

Conread position: 308-674
Cow position: chr11:54186088-54186451 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 244
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 196, 124

Conread position: 309-668
Cow position: chr11:6373494-6373874 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 249
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 235

Conread position: 310-666
Cow position: chr11:63919144-63918775 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 238
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 122, 158

Conread position: 312-489
Cow position: chr11:72409205-72409029 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 139, 121

Conread position: 312-498
Cow position: chr11:50871435-50871252 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 112, 49

Conread position: 312-637
Cow position: chr11:29328354-29328005 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 240
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 139, 121

Conread position: 312-662
Cow position: chr11:36115114-36114770 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 120, 57

Conread position: 312-662
Cow position: chr11:76497046-76496667 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 262
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 120, 80

Conread position: 312-666
Cow position: chr11:14343375-14343734 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 237
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 118, 29

Conread position: 312-673
Cow position: chr11:29655535-29655920 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 272
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 121, 77

Conread position: 313-489
Cow position: chr11:55487538-55487712 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 119, 11

Conread position: 315-642
Cow position: chr11:23909193-23909544 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 240
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 117, 76

Conread position: 315-673
Cow position: chr11:78361814-78361452 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 264
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 69, 28

Conread position: 321-650
Cow position: chr11:75885351-75885691 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 233
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 64, 7

Conread position: 324-449
Cow position: chr11:53585305-53585433 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 324-488
Cow position: chr11:56296625-56296788 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 131

Conread position: 324-489
Cow position: chr11:20428079-20428247 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 324-489
Cow position: chr11:74849246-74849405 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 324-498
Cow position: chr11:9995273-9995444 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 27

Conread position: 324-498
Cow position: chr11:62201995-62201822 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 47

Conread position: 324-577
Cow position: chr11:50876883-50877152 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 108, 27

Conread position: 324-614
Cow position: chr11:17150888-17150589 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 108, 124

Conread position: 324-630
Cow position: chr11:62873042-62872728 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 20, 120

Conread position: 324-639
Cow position: chr11:66307926-66307611 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 109, 121

Conread position: 324-649
Cow position: chr11:26656282-26656630 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 242
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 60, 47

Conread position: 324-650
Cow position: chr11:15290624-15290962 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 127, 94

Conread position: 324-650
Cow position: chr11:44004035-44004376 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 237
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 109, 29

Conread position: 324-666
Cow position: chr11:72982541-72982915 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 259
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 106, 126

Conread position: 324-674
Cow position: chr11:8112185-8111811 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 266
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 24, 122

Conread position: 324-675
Cow position: chr11:55207034-55206645 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 267
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 122

Conread position: 324-675
Cow position: chr11:75013218-75013563 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 233
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 167, 90

Conread position: 324-676
Cow position: chr11:54364687-54364332 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 245
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 131

Conread position: 326-562
Cow position: chr11:27805934-27805683 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 10

Conread position: 326-676
Cow position: chr11:42540511-42540858 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 247
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 235, 66

Conread position: 327-637
Cow position: chr11:39473804-39474114 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 207
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 152, 76

Conread position: 334-558
Cow position: chr11:56031113-56031334 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 111

Conread position: 335-489
Cow position: chr11:58418321-58418168 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 48, 36

Conread position: 339-675
Cow position: chr11:54777382-54777716 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 229
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 124, 51

Conread position: 344-670
Cow position: chr11:35222500-35222851 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 236
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 68, 46

Conread position: 374-649
Cow position: chr11:34657658-34657941 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 114, 55

Conread position: 387-650
Cow position: chr11:17115795-17116052 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 39

Conread position: 396-670
Cow position: chr11:6567985-6567699 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 58

Conread position: 399-666
Cow position: chr11:16418810-16418529 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 31

Conread position: 461-675
Cow position: chr11:35703723-35703490 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 0

Show alignments to all cow chromosomes.