Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8048C15.3 |
| Conread position: | 312-674 |
| Cow position: | chr12:8589828-8590200 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 126, 103 |
| Conread position: | 313-493 |
| Cow position: | chr12:28841680-28841854 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 315-649 |
| Cow position: | chr12:30857440-30857096 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 136, 51 |
| Conread position: | 315-660 |
| Cow position: | chr12:29067174-29067522 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 115, 29 |
| Conread position: | 323-488 |
| Cow position: | chr12:38026053-38025892 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 323-557 |
| Cow position: | chr12:48452490-48452724 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 108, 151 |
| Conread position: | 324-489 |
| Cow position: | chr12:7170095-7169933 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 324-489 |
| Cow position: | chr12:9252794-9252958 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 41 |
| Conread position: | 324-649 |
| Cow position: | chr12:14736397-14736724 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 95, 47 |
| Conread position: | 324-666 |
| Cow position: | chr12:14812516-14812853 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 324, 24 |
| Conread position: | 324-666 |
| Cow position: | chr12:37797673-37798034 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 245 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 324-669 |
| Cow position: | chr12:8168506-8168859 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 106, 60 |
| Conread position: | 324-673 |
| Cow position: | chr12:18003184-18002807 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 50, 41 |
| Conread position: | 324-674 |
| Cow position: | chr12:25531771-25532152 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 106, 68 |
| Conread position: | 324-675 |
| Cow position: | chr12:40435455-40435095 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 108, 129 |
| Conread position: | 324-675 |
| Cow position: | chr12:40648089-40648431 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 176, 55 |
| Conread position: | 325-670 |
| Cow position: | chr12:20463478-20463110 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 164, 49 |
| Conread position: | 326-600 |
| Cow position: | chr12:20008243-20007973 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 102, 88 |
| Conread position: | 327-569 |
| Cow position: | chr12:20213957-20214199 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 102, 65 |
| Conread position: | 327-674 |
| Cow position: | chr12:39799569-39799196 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 30 |
| Conread position: | 334-664 |
| Cow position: | chr12:37444244-37444581 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 143, 99 |
| Conread position: | 334-675 |
| Cow position: | chr12:8874616-8874263 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 98, 118 |
| Conread position: | 334-675 |
| Cow position: | chr12:15472861-15473217 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 164, 74 |
| Conread position: | 345-670 |
| Cow position: | chr12:12311418-12311070 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 26 |
| Conread position: | 346-545 |
| Cow position: | chr12:42194184-42194385 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 98, 87 |
| Conread position: | 374-675 |
| Cow position: | chr12:17476477-17476769 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 139, 66 |
| Conread position: | 431-674 |
| Cow position: | chr12:33806854-33806598 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 30, 161 |
Show alignments to all cow chromosomes.