Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8048C15.3 |
| Conread position: | 285-668 |
| Cow position: | chr15:16425425-16425042 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 279 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 147, 17 |
| Conread position: | 303-493 |
| Cow position: | chr15:13791562-13791751 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 95 |
| Conread position: | 306-630 |
| Cow position: | chr15:51246238-51245903 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 16, 202 |
| Conread position: | 312-639 |
| Cow position: | chr15:26148663-26148998 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 120, 143 |
| Conread position: | 312-646 |
| Cow position: | chr15:30050888-30051244 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 139, 46 |
| Conread position: | 312-670 |
| Cow position: | chr15:5883748-5884138 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 273 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 118, 40 |
| Conread position: | 312-671 |
| Cow position: | chr15:14547916-14548284 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 152, 123 |
| Conread position: | 313-675 |
| Cow position: | chr15:33196535-33196156 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 272 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 119, 59 |
| Conread position: | 323-675 |
| Cow position: | chr15:41805834-41806199 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 110, 28 |
| Conread position: | 324-569 |
| Cow position: | chr15:16081216-16080957 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 122 |
| Conread position: | 324-579 |
| Cow position: | chr15:25064014-25063749 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 108, 42 |
| Conread position: | 324-649 |
| Cow position: | chr15:50206902-50206565 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 26, 42 |
| Conread position: | 324-664 |
| Cow position: | chr15:39360493-39360852 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 53, 41 |
| Conread position: | 324-666 |
| Cow position: | chr15:49073801-49074147 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 104, 130 |
| Conread position: | 324-670 |
| Cow position: | chr15:24601524-24601157 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 108, 51 |
| Conread position: | 324-670 |
| Cow position: | chr15:49067551-49067912 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 108, 121 |
| Conread position: | 324-672 |
| Cow position: | chr15:29448874-29448511 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 41, 91 |
| Conread position: | 324-674 |
| Cow position: | chr15:30790689-30790328 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 134, 102 |
| Conread position: | 324-679 |
| Cow position: | chr15:10784755-10785132 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 108, 33 |
| Conread position: | 324-684 |
| Cow position: | chr15:40110642-40111033 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 152, 108 |
| Conread position: | 325-489 |
| Cow position: | chr15:15171179-15171342 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 107, 111 |
| Conread position: | 326-650 |
| Cow position: | chr15:8272033-8271705 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 165, 64 |
| Conread position: | 330-666 |
| Cow position: | chr15:24963491-24963849 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 108, 102 |
| Conread position: | 334-673 |
| Cow position: | chr15:40203576-40203939 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 98, 330 |
| Conread position: | 334-675 |
| Cow position: | chr15:9973942-9974298 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 149, 99 |
| Conread position: | 335-621 |
| Cow position: | chr15:17031355-17031631 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 96, 36 |
| Conread position: | 336-639 |
| Cow position: | chr15:35159275-35159588 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 96, 112 |
| Conread position: | 336-673 |
| Cow position: | chr15:10047905-10047563 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 337-593 |
| Cow position: | chr15:40837591-40837850 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 114, 28 |
| Conread position: | 374-668 |
| Cow position: | chr15:8360897-8361212 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 59, 19 |
Show alignments to all cow chromosomes.