Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8048C15.3 |
| Conread position: | 290-489 |
| Cow position: | chr17:32454769-32454967 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 79 |
| Conread position: | 309-488 |
| Cow position: | chr17:28893345-28893169 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 83 |
| Conread position: | 310-489 |
| Cow position: | chr17:26510062-26509891 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 171, 82 |
| Conread position: | 312-428 |
| Cow position: | chr17:27375323-27375207 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 312-642 |
| Cow position: | chr17:26476925-26477269 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 248 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 13, 160 |
| Conread position: | 312-642 |
| Cow position: | chr17:32292966-32292622 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 63, 130 |
| Conread position: | 313-639 |
| Cow position: | chr17:20696014-20696350 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 119, 32 |
| Conread position: | 315-676 |
| Cow position: | chr17:23120656-23121024 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 208, 50 |
| Conread position: | 315-678 |
| Cow position: | chr17:26248083-26248467 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 100, 18 |
| Conread position: | 324-480 |
| Cow position: | chr17:16320973-16321128 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 106, 130 |
| Conread position: | 324-488 |
| Cow position: | chr17:7704330-7704167 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 324-488 |
| Cow position: | chr17:38949044-38949207 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 108, 130 |
| Conread position: | 324-511 |
| Cow position: | chr17:18730450-18730267 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 102, 80 |
| Conread position: | 324-561 |
| Cow position: | chr17:26290342-26290593 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 122 |
| Conread position: | 324-621 |
| Cow position: | chr17:27788011-27788323 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 108, 19 |
| Conread position: | 324-669 |
| Cow position: | chr17:30143150-30142767 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 91, 359 |
| Conread position: | 324-670 |
| Cow position: | chr17:26813561-26813216 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 106, 121 |
| Conread position: | 324-670 |
| Cow position: | chr17:32306627-32306254 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 256 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 108, 121 |
| Conread position: | 324-675 |
| Cow position: | chr17:29510226-29509865 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 6, 69 |
| Conread position: | 325-675 |
| Cow position: | chr17:8125132-8124786 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 126, 98 |
| Conread position: | 326-670 |
| Cow position: | chr17:42283801-42283441 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 100, 35 |
| Conread position: | 330-607 |
| Cow position: | chr17:28467583-28467863 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 100, 61 |
| Conread position: | 338-638 |
| Cow position: | chr17:26242593-26242290 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 91, 114 |
| Conread position: | 339-642 |
| Cow position: | chr17:30065427-30065737 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 150, 58 |
| Conread position: | 344-587 |
| Cow position: | chr17:23491103-23490870 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 85, 34 |
| Conread position: | 354-670 |
| Cow position: | chr17:29830163-29830509 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 69, 95 |
| Conread position: | 366-676 |
| Cow position: | chr17:29561369-29561700 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 66, 31 |
| Conread position: | 377-638 |
| Cow position: | chr17:33488727-33488448 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 56, 15 |
| Conread position: | 378-670 |
| Cow position: | chr17:11747175-11746871 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 7, 47 |
Show alignments to all cow chromosomes.