Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8048C15.3 |
| Conread position: | 304-569 |
| Cow position: | chr18:40220703-40220974 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 126, 41 |
| Conread position: | 304-614 |
| Cow position: | chr18:21213556-21213889 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 312-675 |
| Cow position: | chr18:51034819-51035211 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 120, 52 |
| Conread position: | 315-618 |
| Cow position: | chr18:46054048-46054348 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 95, 76 |
| Conread position: | 324-489 |
| Cow position: | chr18:43144637-43144472 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 324-513 |
| Cow position: | chr18:6741729-6741543 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 108, 121 |
| Conread position: | 324-569 |
| Cow position: | chr18:23330903-23331156 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 157, 54 |
| Conread position: | 324-621 |
| Cow position: | chr18:49941256-49941561 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 44 |
| Conread position: | 324-658 |
| Cow position: | chr18:16311880-16312211 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 108, 10 |
| Conread position: | 324-673 |
| Cow position: | chr18:21413901-21413533 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 250 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 19, 90 |
| Conread position: | 324-675 |
| Cow position: | chr18:24711953-24711580 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 121 |
| Conread position: | 325-532 |
| Cow position: | chr18:16180142-16180349 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 159, 82 |
| Conread position: | 325-673 |
| Cow position: | chr18:23125720-23125360 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 107, 93 |
| Conread position: | 330-679 |
| Cow position: | chr18:31983743-31984117 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 102, 115 |
| Conread position: | 334-666 |
| Cow position: | chr18:18056551-18056189 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 335-666 |
| Cow position: | chr18:8103246-8102901 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 116, 97 |
| Conread position: | 338-678 |
| Cow position: | chr18:36378951-36378583 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 340-628 |
| Cow position: | chr18:49656808-49656497 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 344-636 |
| Cow position: | chr18:1198747-1199037 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 137, 82 |
| Conread position: | 344-675 |
| Cow position: | chr18:23044570-23044893 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 107, 131 |
| Conread position: | 345-670 |
| Cow position: | chr18:16195113-16195458 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 106, 88 |
| Conread position: | 366-674 |
| Cow position: | chr18:14508589-14508261 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 68 |
| Conread position: | 374-666 |
| Cow position: | chr18:45833882-45833578 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 17 |
| Conread position: | 377-677 |
| Cow position: | chr18:6374690-6375015 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 56, 42 |
| Conread position: | 451-662 |
| Cow position: | chr18:36316533-36316743 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 112, 46 |
| Conread position: | 506-670 |
| Cow position: | chr18:32316499-32316670 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 132 |
| Conread position: | 509-670 |
| Cow position: | chr18:11314641-11314470 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 142 |
| Conread position: | 511-675 |
| Cow position: | chr18:23069240-23069405 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 61 |
| Conread position: | 512-675 |
| Cow position: | chr18:44113426-44113598 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 55, 138 |
Show alignments to all cow chromosomes.