Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8048C15.3 |
| Conread position: | 304-489 |
| Cow position: | chr21:40178184-40178367 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 126, 75 |
| Conread position: | 304-498 |
| Cow position: | chr21:876212-876405 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 35, 142 |
| Conread position: | 310-488 |
| Cow position: | chr21:39081246-39081066 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 60 |
| Conread position: | 324-496 |
| Cow position: | chr21:21033429-21033598 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 136, 8 |
| Conread position: | 324-564 |
| Cow position: | chr21:27355266-27355515 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 93, 153 |
| Conread position: | 324-650 |
| Cow position: | chr21:26254869-26255215 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 108, 129 |
| Conread position: | 324-659 |
| Cow position: | chr21:35355762-35355424 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 108, 41 |
| Conread position: | 324-670 |
| Cow position: | chr21:3605169-3605513 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 251 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 77, 110 |
| Conread position: | 324-670 |
| Cow position: | chr21:48314799-48314446 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 254 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 65, 54 |
| Conread position: | 324-675 |
| Cow position: | chr21:29634410-29634779 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 257 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 140, 109 |
| Conread position: | 324-683 |
| Cow position: | chr21:8219669-8220055 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 110, 100 |
| Conread position: | 325-650 |
| Cow position: | chr21:37646748-37646410 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 163, 9 |
| Conread position: | 327-489 |
| Cow position: | chr21:34511424-34511266 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 105, 109 |
| Conread position: | 327-675 |
| Cow position: | chr21:4861276-4860917 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 103, 140 |
| Conread position: | 340-565 |
| Cow position: | chr21:9328923-9328695 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 92, 31 |
| Conread position: | 372-676 |
| Cow position: | chr21:14382371-14382070 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 518-674 |
| Cow position: | chr21:36680941-36681087 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 522-677 |
| Cow position: | chr21:21405374-21405220 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 50 |
| Conread position: | 569-673 |
| Cow position: | chr21:36720111-36720006 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 52, 79 |
Show alignments to all cow chromosomes.