Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8048C15.3 |
| Conread position: | 304-489 |
| Cow position: | chr25:16039534-16039350 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 142 |
| Conread position: | 312-650 |
| Cow position: | chr25:8348222-8347878 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 163 |
| Conread position: | 312-666 |
| Cow position: | chr25:11480515-11480158 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 110, 36 |
| Conread position: | 312-670 |
| Cow position: | chr25:36798394-36798013 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 120, 133 |
| Conread position: | 313-569 |
| Cow position: | chr25:5917367-5917100 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 118, 174 |
| Conread position: | 315-511 |
| Cow position: | chr25:13215808-13215614 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 56, 141 |
| Conread position: | 315-621 |
| Cow position: | chr25:19054750-19055072 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 178, 117 |
| Conread position: | 323-489 |
| Cow position: | chr25:11920552-11920387 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 125, 116 |
| Conread position: | 324-489 |
| Cow position: | chr25:4188305-4188141 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 107, 121 |
| Conread position: | 324-511 |
| Cow position: | chr25:18610792-18610970 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 324-590 |
| Cow position: | chr25:12449423-12449146 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 106, 139 |
| Conread position: | 324-638 |
| Cow position: | chr25:10411951-10411619 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 108, 51 |
| Conread position: | 324-642 |
| Cow position: | chr25:32116849-32116525 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 108, 27 |
| Conread position: | 324-650 |
| Cow position: | chr25:24653172-24653516 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 240 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 100, 50 |
| Conread position: | 324-675 |
| Cow position: | chr25:5212120-5211759 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 116, 31 |
| Conread position: | 324-675 |
| Cow position: | chr25:24663247-24662880 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 119, 20 |
| Conread position: | 335-498 |
| Cow position: | chr25:22277504-22277344 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 95, 110 |
| Conread position: | 336-569 |
| Cow position: | chr25:8905137-8905379 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 8, 20 |
| Conread position: | 336-649 |
| Cow position: | chr25:14995220-14994901 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 106, 129 |
| Conread position: | 351-675 |
| Cow position: | chr25:1583910-1583572 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 83 |
| Conread position: | 459-675 |
| Cow position: | chr25:13831969-13832206 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 109 |
Show alignments to all cow chromosomes.