Cow genome map

Conread name: Ss1.1-Pig4-TMW8048C15.3

Conread position: 51-660
Cow position: chr7:2999671-3000286 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 48

Conread position: 301-610
Cow position: chr7:8082306-8082620 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 215
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 74, 100

Conread position: 302-639
Cow position: chr7:6193501-6193854 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 234
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 141

Conread position: 307-668
Cow position: chr7:9047537-9047917 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 252
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 123, 16

Conread position: 308-511
Cow position: chr7:45585771-45585573 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 311-676
Cow position: chr7:26493391-26493008 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 259
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 121, 37

Conread position: 312-489
Cow position: chr7:46464480-46464311 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 312-635
Cow position: chr7:14811309-14810971 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 234
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 178, 121

Conread position: 312-642
Cow position: chr7:17983596-17983939 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 229
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 152, 95

Conread position: 312-647
Cow position: chr7:17834379-17834725 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 240
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 116, 95

Conread position: 312-650
Cow position: chr7:15814014-15814367 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 174, 103

Conread position: 312-650
Cow position: chr7:17796707-17796349 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 118, 133

Conread position: 312-650
Cow position: chr7:20889063-20889419 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 238
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 256

Conread position: 312-657
Cow position: chr7:17392294-17391929 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 249
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 144, 351

Conread position: 312-665
Cow position: chr7:35756841-35757199 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 254
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 119, 80

Conread position: 312-668
Cow position: chr7:26599625-26600008 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 264
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 116, 133

Conread position: 312-670
Cow position: chr7:1215875-1216254 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 255
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 120, 26

Conread position: 312-674
Cow position: chr7:42161800-42162187 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 270
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 111, 141

Conread position: 312-675
Cow position: chr7:18352654-18353037 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 259
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 179, 95

Conread position: 313-650
Cow position: chr7:51473028-51472681 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 178, 119

Conread position: 313-672
Cow position: chr7:29112169-29112527 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 251
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 178, 115

Conread position: 323-674
Cow position: chr7:13052763-13053138 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 262
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 107, 124

Conread position: 324-447
Cow position: chr7:35744188-35744065 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 324-485
Cow position: chr7:9810144-9809984 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 109, 131

Conread position: 324-494
Cow position: chr7:27237149-27237316 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 106, 34

Conread position: 324-650
Cow position: chr7:14728833-14729169 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 219
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 129

Conread position: 324-650
Cow position: chr7:26389305-26388954 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 251
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 108, 121

Conread position: 324-658
Cow position: chr7:37972521-37972175 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 243
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 167, 19

Conread position: 324-664
Cow position: chr7:14775302-14775663 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 106, 121

Conread position: 324-668
Cow position: chr7:1329149-1329522 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 253
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 115, 126

Conread position: 324-668
Cow position: chr7:15361745-15362089 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 245
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 17, 28

Conread position: 324-673
Cow position: chr7:8887714-8887330 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 259
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 64, 55

Conread position: 324-673
Cow position: chr7:13934354-13933981 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 273
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 107, 128

Conread position: 324-673
Cow position: chr7:15819260-15819623 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 250
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 66, 128

Conread position: 324-674
Cow position: chr7:16217629-16217254 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 253
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 20, 78

Conread position: 324-675
Cow position: chr7:7890349-7889967 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 266
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 108, 121

Conread position: 324-675
Cow position: chr7:17628438-17628810 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 260
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 20, 50

Conread position: 325-511
Cow position: chr7:20944977-20945159 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 83

Conread position: 325-511
Cow position: chr7:24278443-24278259 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 104, 120

Conread position: 326-449
Cow position: chr7:9747849-9747723 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 330-674
Cow position: chr7:14891796-14892154 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 257
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 121, 103

Conread position: 332-631
Cow position: chr7:34798945-34798642 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 200
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 121

Conread position: 340-670
Cow position: chr7:16093489-16093145 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 236
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 92, 105

Conread position: 361-662
Cow position: chr7:17710654-17710971 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 100, 24

Conread position: 374-638
Cow position: chr7:8405759-8405485 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 74

Conread position: 374-666
Cow position: chr7:14790873-14791169 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 212
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 15

Conread position: 388-672
Cow position: chr7:5579111-5579402 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 45

Conread position: 414-670
Cow position: chr7:47110632-47110904 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 36

Conread position: 506-670
Cow position: chr7:1833467-1833300 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 5, 138

Conread position: 518-675
Cow position: chr7:67656141-67655974 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 0

Show alignments to all cow chromosomes.