Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8048C15.3 |
| Conread position: | 304-661 |
| Cow position: | chr9:19535505-19535123 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 311-675 |
| Cow position: | chr9:27368854-27368497 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 120, 93 |
| Conread position: | 313-498 |
| Cow position: | chr9:39199965-39200149 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 81, 133 |
| Conread position: | 315-674 |
| Cow position: | chr9:14798505-14798875 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 263 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 117, 36 |
| Conread position: | 315-675 |
| Cow position: | chr9:19902561-19902173 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 25, 51 |
| Conread position: | 324-489 |
| Cow position: | chr9:35023730-35023895 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 127, 49 |
| Conread position: | 324-503 |
| Cow position: | chr9:25011039-25010864 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 106, 62 |
| Conread position: | 324-568 |
| Cow position: | chr9:48140279-48140037 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 119 |
| Conread position: | 324-645 |
| Cow position: | chr9:54919637-54919321 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 46, 127 |
| Conread position: | 324-664 |
| Cow position: | chr9:21741362-21741027 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 94, 68 |
| Conread position: | 324-666 |
| Cow position: | chr9:5864450-5864794 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 108, 19 |
| Conread position: | 324-679 |
| Cow position: | chr9:38419457-38419815 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 270 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 108, 24 |
| Conread position: | 326-666 |
| Cow position: | chr9:32606616-32606966 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 164, 101 |
| Conread position: | 326-670 |
| Cow position: | chr9:3838726-3839084 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 39 |
| Conread position: | 327-650 |
| Cow position: | chr9:50784684-50785019 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 124, 22 |
| Conread position: | 334-667 |
| Cow position: | chr9:19594046-19594395 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 97, 78 |
| Conread position: | 373-675 |
| Cow position: | chr9:52434094-52433779 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 9, 71 |
| Conread position: | 377-675 |
| Cow position: | chr9:25020486-25020170 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 57 |
| Conread position: | 511-675 |
| Cow position: | chr9:47398585-47398752 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 133 |
Show alignments to all cow chromosomes.