Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8049B07.5
        

               Conread position:
               473-818
               

               Cow position:
               chr6:49428908-49429253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               216, 203
               

               Conread position:
               473-916
               

               Cow position:
               chr6:49428740-49429183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               277
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               310, 320
               

               Conread position:
               473-922
               

               Cow position:
               chr6:49428320-49428769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               473-922
               

               Cow position:
               chr6:49428572-49429021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               49, 61
               

               Conread position:
               473-922
               

               Cow position:
               chr6:49428656-49429105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               281
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               40, 35
               

               Conread position:
               473-922
               

               Cow position:
               chr6:49428992-49429441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               144, 125
               

               Conread position:
               473-956
               

               Cow position:
               chr6:49428488-49428971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               294
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               40, 27
               

               Conread position:
               488-956
               

               Cow position:
               chr6:49428251-49428719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               34, 40
               
Show alignments to all cow chromosomes.