Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8051N21.3 |
| Conread position: | 209-501 |
| Cow position: | chr1:54267695-54267983 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 53 |
| Conread position: | 219-500 |
| Cow position: | chr1:86682336-86682610 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 142, 23 |
| Conread position: | 225-505 |
| Cow position: | chr1:5596984-5597263 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 129, 65 |
| Conread position: | 227-501 |
| Cow position: | chr1:78811264-78810988 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 129, 63 |
| Conread position: | 231-501 |
| Cow position: | chr1:81290725-81290454 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 111, 19 |
| Conread position: | 232-466 |
| Cow position: | chr1:45315411-45315652 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 86, 18 |
| Conread position: | 235-484 |
| Cow position: | chr1:41027290-41027042 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 116, 55 |
| Conread position: | 244-501 |
| Cow position: | chr1:1980901-1981164 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 36 |
| Conread position: | 244-501 |
| Cow position: | chr1:81481176-81481434 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 107, 46 |
| Conread position: | 245-501 |
| Cow position: | chr1:61885121-61884863 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 46 |
| Conread position: | 259-501 |
| Cow position: | chr1:56618462-56618700 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 54, 33 |
| Conread position: | 262-501 |
| Cow position: | chr1:58754607-58754845 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 93, 28 |
| Conread position: | 268-468 |
| Cow position: | chr1:42887095-42887295 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 114, 22 |
| Conread position: | 268-501 |
| Cow position: | chr1:71078777-71079007 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 83, 22 |
| Conread position: | 268-501 |
| Cow position: | chr1:89449083-89448848 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 79, 22 |
| Conread position: | 276-501 |
| Cow position: | chr1:87197997-87197766 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 80, 14 |
| Conread position: | 316-499 |
| Cow position: | chr1:80584564-80584383 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 27 |
| Conread position: | 348-497 |
| Cow position: | chr1:102529758-102529902 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.