Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8051N21.3 |
| Conread position: | 224-501 |
| Cow position: | chr11:20238882-20238598 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 89, 36 |
| Conread position: | 231-501 |
| Cow position: | chr11:63998893-63999163 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 120, 10 |
| Conread position: | 232-501 |
| Cow position: | chr11:34646797-34646514 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 14, 62 |
| Conread position: | 234-537 |
| Cow position: | chr11:17721605-17721917 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 113, 16 |
| Conread position: | 240-501 |
| Cow position: | chr11:40608402-40608670 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 85, 50 |
| Conread position: | 242-501 |
| Cow position: | chr11:55494855-55494604 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 46 |
| Conread position: | 243-486 |
| Cow position: | chr11:18852090-18851849 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 71, 14 |
| Conread position: | 243-499 |
| Cow position: | chr11:80564485-80564221 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 80, 47 |
| Conread position: | 266-501 |
| Cow position: | chr11:50152648-50152889 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 268-496 |
| Cow position: | chr11:1625059-1625294 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 50, 22 |
| Conread position: | 268-496 |
| Cow position: | chr11:17083151-17083381 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 115, 79 |
| Conread position: | 269-501 |
| Cow position: | chr11:17036370-17036603 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 21 |
| Conread position: | 287-500 |
| Cow position: | chr11:45646448-45646667 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 130 |
| Conread position: | 287-501 |
| Cow position: | chr11:30830473-30830689 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 63, 56 |
| Conread position: | 317-501 |
| Cow position: | chr11:26845480-26845668 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 34, 163 |
| Conread position: | 320-500 |
| Cow position: | chr11:47772280-47772465 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 325-483 |
| Cow position: | chr11:36328931-36329091 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 350-501 |
| Cow position: | chr11:16342151-16342304 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 350-501 |
| Cow position: | chr11:69119371-69119218 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.