Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8051N21.3 |
| Conread position: | 13-225 |
| Cow position: | chr16:1313074-1312861 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 219-501 |
| Cow position: | chr16:8738298-8738009 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 28, 73 |
| Conread position: | 227-505 |
| Cow position: | chr16:33705024-33704747 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 34, 64 |
| Conread position: | 230-501 |
| Cow position: | chr16:11584190-11584453 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 124, 20 |
| Conread position: | 244-501 |
| Cow position: | chr16:48398053-48398312 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 92, 46 |
| Conread position: | 245-479 |
| Cow position: | chr16:42078645-42078880 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 97, 45 |
| Conread position: | 245-499 |
| Cow position: | chr16:45139867-45139618 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 24 |
| Conread position: | 250-501 |
| Cow position: | chr16:34753755-34754016 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 85, 36 |
| Conread position: | 267-500 |
| Cow position: | chr16:45294727-45294488 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 72, 23 |
| Conread position: | 268-498 |
| Cow position: | chr16:46433144-46433382 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 268-499 |
| Cow position: | chr16:16571080-16570861 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 115, 22 |
| Conread position: | 268-500 |
| Cow position: | chr16:11134805-11135037 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 83, 22 |
| Conread position: | 268-501 |
| Cow position: | chr16:25839791-25839563 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 115, 22 |
| Conread position: | 269-488 |
| Cow position: | chr16:45122221-45121991 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 21 |
| Conread position: | 289-505 |
| Cow position: | chr16:45678138-45677918 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 296-501 |
| Cow position: | chr16:25387127-25386919 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 17, 112 |
| Conread position: | 315-509 |
| Cow position: | chr16:31880640-31880827 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 188, 28 |
| Conread position: | 320-480 |
| Cow position: | chr16:17460293-17460132 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 28 |
| Conread position: | 331-501 |
| Cow position: | chr16:52790169-52789996 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 5 |
| Conread position: | 332-500 |
| Cow position: | chr16:21040136-21039970 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 11 |
Show alignments to all cow chromosomes.