Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8051N21.3 |
| Conread position: | 226-500 |
| Cow position: | chr17:32332831-32333106 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 121, 24 |
| Conread position: | 227-501 |
| Cow position: | chr17:11664321-11664603 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 86, 21 |
| Conread position: | 228-501 |
| Cow position: | chr17:5422813-5423087 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 20, 67 |
| Conread position: | 231-501 |
| Cow position: | chr17:12959359-12959090 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 105, 119 |
| Conread position: | 232-499 |
| Cow position: | chr17:32138159-32138436 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 29, 59 |
| Conread position: | 232-500 |
| Cow position: | chr17:34790812-34791080 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 108, 28 |
| Conread position: | 237-494 |
| Cow position: | chr17:25511493-25511234 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 114, 53 |
| Conread position: | 242-501 |
| Cow position: | chr17:9824913-9824654 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 100, 48 |
| Conread position: | 242-501 |
| Cow position: | chr17:17059666-17059408 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 50 |
| Conread position: | 243-500 |
| Cow position: | chr17:32989718-32989462 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 108, 34 |
| Conread position: | 243-500 |
| Cow position: | chr17:32993382-32993638 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 108, 34 |
| Conread position: | 243-501 |
| Cow position: | chr17:29995190-29995453 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 70, 47 |
| Conread position: | 244-501 |
| Cow position: | chr17:26574978-26575246 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 101, 46 |
| Conread position: | 245-505 |
| Cow position: | chr17:21039800-21039542 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 46 |
| Conread position: | 268-497 |
| Cow position: | chr17:12325550-12325774 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 22 |
| Conread position: | 268-499 |
| Cow position: | chr17:33933529-33933761 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 22 |
| Conread position: | 268-501 |
| Cow position: | chr17:6318648-6318882 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 83, 23 |
| Conread position: | 268-501 |
| Cow position: | chr17:12536254-12536483 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 116, 22 |
| Conread position: | 268-501 |
| Cow position: | chr17:25800664-25800897 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 51, 22 |
| Conread position: | 268-501 |
| Cow position: | chr17:25901428-25901182 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 45, 22 |
| Conread position: | 268-520 |
| Cow position: | chr17:9932091-9932337 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 117, 22 |
| Conread position: | 270-500 |
| Cow position: | chr17:33288440-33288673 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 20 |
| Conread position: | 280-498 |
| Cow position: | chr17:28284823-28285043 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 97, 54 |
| Conread position: | 287-501 |
| Cow position: | chr17:24824451-24824227 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 42, 201 |
| Conread position: | 289-506 |
| Cow position: | chr17:18108886-18109105 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 60, 119 |
| Conread position: | 326-501 |
| Cow position: | chr17:11368689-11368866 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 375-501 |
| Cow position: | chr17:3577650-3577521 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.